RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TBC1D3BA6NDS4 549 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 C1QTNF9BB2RNN3 333 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 NEDD8-MDP1E9PL57 170 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 O00370 1275 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 GIPC1O14908 333 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 HOXC11O43248 304 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 STX10O60499 249 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 APBB3O95704 486 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 LCP1P13796 627 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TYRP14679 529 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CD19P15391 556 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 GRIA2P42262 883 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TNFRSF4P43489 277 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TUBP50607 506 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TKTL1P51854 596 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 MRPS21P82921 87 aaKnown RBP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 LRRC63Q05C16 580 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 COL9A2Q14055 689 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CRY1Q16526 586 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CCDC40Q4G0X9 1142 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 EGFLAMQ63HQ2 1017 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 PM20D1Q6GTS8 502 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TCEAL6Q6IPX3 200 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 ANO7Q6IWH7 933 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 PMF1Q6P1K2 205 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TMEM270Q6UE05 265 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CCDC186Q7Z3E2 898 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CACNA2D4Q7Z3S7 1137 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 DDX42Q86XP3 938 aaKnown RBP eCLIP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 IRF2BP1Q8IU81 584 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TRIM59Q8IWR1 403 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 MDGA1Q8NFP4 955 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TSTD1Q8NFU3 115 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CLEC4CQ8WTT0 213 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 EDEM1Q92611 657 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 TCEAL3Q969E4 200 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CEP63Q96MT8 703 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 BBS2Q9BXC9 721 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 UBXN6Q9BZV1 441 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 SLC6A17Q9H1V8 727 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 CD93Q9NPY3 652 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 EBF1Q9UH73 591 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 MBD1Q9UIS9 605 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 MMP17Q9ULZ9 603 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 THADAQ6YHU6 1953 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 SPAG17Q6Q759 2223 aa7.67□□□□□ -1.18
PRPF4B-208ENST00000490653 FREM2Q5SZK8 3169 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 CCDC163A0A0D9SF12 145 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 GOLGA6L7A0A1B0GV03 622 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 YJEFN3A6XGL0 299 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 PATE3B3GLJ2 98 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 E7ENQ6 273 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 GNB5O14775 395 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 PSMA7O14818 248 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 XPO1O14980 1071 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 TSPAN3O60637 253 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 LRP3O75074 770 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 EPN2O95208 641 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 RALAP11233 206 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 VDRP11473 427 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 EPXP11678 715 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SLC9A1P19634 815 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SPINK2P20155 84 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SDHBP21912 280 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 CORO1AP31146 461 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 YWHAGP61981 247 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 ADIGQ0VDE8 80 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SGO2Q562F6 1265 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 C10orf76Q5T2E6 689 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 FYB2Q5VWT5 728 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 BSPRYQ5W0U4 402 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 DENND1BQ6P3S1 775 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 RASSF3Q86WH2 238 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 DENND1CQ8IV53 801 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 KIAA1958Q8N8K9 716 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 OLIG1Q8TAK6 271 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SLC35F5Q8WV83 523 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 SECISBP2LQ93073 1101 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 OTUB2Q96DC9 234 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 MYEOVQ96EZ4 313 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 FAXDC2Q96IV6 333 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 ZC3H10Q96K80 434 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 CRACR2AQ9BSW2 395 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 METTL14Q9HCE5 456 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 PNPLA8Q9NP80 782 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 DNAJC17Q9NVM6 304 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 DEC1Q9P2X7 70 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 FBXO10Q9UK96 956 aa7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 AJAP1Q9UKB5 411 aaPredicted RBP7.66□□□□□ -1.18
PRPF4B-208ENST00000490653 AGO1Q9UL18 857 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms