RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ATXN3P54252 364 aaPredicted RBP14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 GYS2P54840 703 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 POLR2LP62875 67 aaKnown RBP14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTPN20Q4JDL3 420 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 IRF2BP2Q7Z5L9 587 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZYG11BQ9C0D3 744 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCDH9Q9HC56 1237 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 DMGDHQ9UI17 866 aaKnown RBP14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 TRIM49D1C9J1S8 452 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 APOC4-APOC2K7ER74 178 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 KIF3CO14782 793 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 NRP1O14786 923 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 TRIM16O95361 564 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 APOC2P02655 101 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 FBXO36Q8NEA4 188 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SDCCAG3Q96C92 435 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SPATA17Q96L03 361 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 FCRL2Q96LA5 508 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 PPCSQ9HAB8 311 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 DRG1Q9Y295 367 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SUPT3HB4E1H0 165 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 VPS26AO75436 327 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SUPT3HO75486 399 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 ERCC2P18074 760 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 RGL4Q8IZJ4 473 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 KREMEN2Q8NCW0 462 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 POLR1EQ9GZS1 481 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 EPS15L1Q9UBC2 864 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 NAALADL1Q9UQQ1 740 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 RP1L1Q8IWN7 2480 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 HSPA1AP0DMV8 641 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 HSPA1BP0DMV9 641 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 RBL1P28749 1068 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SERPINA4P29622 427 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 CDH17Q12864 832 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 GPM6BQ13491 265 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZCWPW2Q504Y3 356 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SPDYAQ5MJ70 313 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 ARMC12Q5T9G4 340 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 OOSP2Q86WS3 158 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 CPXM1Q96SM3 734 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 DMAC2Q9NW81 257 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SAE1Q9UBE0 346 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 CLCA2Q9UQC9 943 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 PDZK1P1A8MUH7 402 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 A8MX80 341 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 MMP8P22894 467 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 HDAC4P56524 1084 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 TBCCQ15814 346 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM83EQ2M2I3 478 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 FSCBQ5H9T9 825 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTAR1Q7Z6K3 402 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 HJURPQ8NCD3 748 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZSWIM2Q8NEG5 633 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 MCRS1Q96EZ8 462 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCED1BQ96HM7 432 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 MS4A4AQ96JQ5 239 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 VAT1Q99536 393 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 STN1Q9H668 368 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 PIH1D1Q9NWS0 290 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 GMIPQ9P107 970 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 CFAP97Q9P2B7 532 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 SMG5Q9UPR3 1016 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-205ENST00000490638 MDM4O15151 490 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 PJA2O43164 708 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 USP12O75317 370 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 GLI1P08151 1106 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 TKTP29401 623 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 SLC5A3P53794 718 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 UGT3A1Q6NUS8 523 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 TMC5Q6UXY8 1006 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZNF212Q9UDV6 495 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM153AQ9UHL3 310 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 DUOX1Q9NRD9 1551 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 FRMD3A2A2Y4 597 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 DDHD2O94830 711 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 AGTP01019 485 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 VCLP18206 1134 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 PBLDP30039 288 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 FOXD4Q12950 439 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM133BQ5BKY9 247 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 TTC7BQ86TV6 843 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 NAT16Q8N8M0 369 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 GRIN3AQ8TCU5 1115 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTPN18Q99952 460 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 C16orf70Q9BSU1 422 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 PRDM12Q9H4Q4 367 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 CAPN7Q9Y6W3 813 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 ADGRA3Q8IWK6 1321 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 GLP2RO95838 553 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 KIAA1324Q6UXG2 1013 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 PHACTR4Q8IZ21 702 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 YIPF2Q9BWQ6 316 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 LHX5Q9H2C1 402 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms