RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GCLMP48507 274 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 VAMP7P51809 220 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 C21orf59P57076 290 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 ZBTB16Q05516 673 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 TRIP4Q15650 581 aaPredicted RBP14.58□□□□□ -0.08
VARS-227ENST00000489979 PRAMEF14Q5SWL7 426 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 ADIPOR2Q86V24 386 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 PIGZQ86VD9 579 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 GATAD2AQ86YP4 633 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 FMNL3Q8IVF7 1028 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 NXPE2Q96DL1 559 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 HEXIM2Q96MH2 286 aaKnown RBP14.58□□□□□ -0.08
VARS-227ENST00000489979 DNAI2Q9GZS0 605 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 FBRSQ9HAH7 460 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 ABCB8Q9NUT2 735 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 FRMD4BQ9Y2L6 1034 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 MYLKQ15746 1914 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 ASH1LQ9NR48 2969 aaKnown RBP14.58□□□□□ -0.08
VARS-227ENST00000489979 COL5A1P20908 1838 aaPredicted RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 KALRNO60229 2985 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 A0A1B0GTQ1 180 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 CBX4O00257 560 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 PDXKO00764 312 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 ENC1O14682 589 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 TLX3O43711 291 aaPredicted RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 DFNA5O60443 496 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 IGHV4-34P06331 123 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 TRIM49P0CI25 452 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 TRIM49CP0CI26 452 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 RACK1P63244 317 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 PDE4CQ08493 712 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 DNAJC3Q13217 504 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 TTC31Q49AM3 519 aaPredicted RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 RAB41Q5JT25 222 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 C6orf118Q5T5N4 469 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 MBLAC2Q68D91 279 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 KIAA0895LQ68EN5 471 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 ZC3H3Q8IXZ2 948 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 AHI1Q8N157 1196 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS-227ENST00000489979 NDRG1Q92597 394 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 TMA16Q96EY4 203 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 INTS4Q96HW7 963 aaKnown RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 SLC6A18Q96N87 628 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 ACE2Q9BYF1 805 aaPredicted RBP14.57□□□□□ -0.08
VARS-227ENST00000489979 UBXN6Q9BZV1 441 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 PRORYQ9H606 182 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 MMRN2Q9H8L6 949 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 FAM13BQ9NYF5 915 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 GGA2Q9UJY4 613 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 PCDHGA1Q9Y5H4 931 aa14.57□□□□□ -0.08
VARS-227ENST00000489979 FAM47DPA6NHR8 397 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 TK2O00142 265 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 VILLO15195 856 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 ATXN7O15265 892 aaPredicted RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 LDOC1O95751 146 aaPredicted RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 DLDP09622 509 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 PABPC1P11940 636 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 HNF1BP35680 557 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 EIF2S3P41091 472 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 SGSHP51688 502 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 TKTL1P51854 596 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 SEMG2Q02383 582 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 PPP3CAQ08209 521 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 KMT5BQ4FZB7 885 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 ZNF776Q68DI1 518 aaPredicted RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 LRRC69Q6ZNQ3 347 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 KIAA0907Q7Z7F0 614 aaPredicted RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 CEP57L1Q8IYX8 460 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 CCDC150Q8NCX0 1101 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 GANCQ8TET4 914 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 GOLGA1Q92805 767 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 CNDP2Q96KP4 475 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 ELF4Q99607 663 aaPredicted RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 ULBP1Q9BZM6 244 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 MTG2Q9H4K7 406 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 SUN2Q9UH99 717 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 SFMBT1Q9UHJ3 866 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 HBS1LQ9Y450 684 aaKnown RBP14.56□□□□□ -0.08
VARS-227ENST00000489979 RAI2Q9Y5P3 530 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 AK5Q9Y6K8 562 aa14.56□□□□□ -0.08
VARS-227ENST00000489979 A0A1W2PPC4 97 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 TULP2O00295 520 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 CALUO43852 315 aaPredicted RBP14.55□□□□□ -0.08
VARS-227ENST00000489979 RFPL3O75679 317 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 ZBED1O96006 694 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 WNT1P04628 370 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 ATP5BP06576 529 aaKnown RBP14.55□□□□□ -0.08
VARS-227ENST00000489979 ITGAVP06756 1048 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 ZNF445P59923 1031 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 TARDBPQ13148 414 aaKnown RBP eCLIP14.55□□□□□ -0.08
VARS-227ENST00000489979 SHBQ15464 509 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 ADGRF1Q5T601 910 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 RESP18Q5W5W9 173 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms