RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 LRRC31Q6UY01 552 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 LGI2Q8N0V4 545 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 C12orf50Q8NA57 414 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 SUMF1Q8NBK3 374 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 EPS8L1Q8TE68 723 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 EZH1Q92800 747 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 GANQ9H2C0 597 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 WDCPQ9H6R7 721 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 C2orf42Q9NWW7 574 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 ELOVL2Q9NXB9 296 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 CYTH4Q9UIA0 394 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 STOML2Q9UJZ1 356 aa11.62□□□□□ -0.55
ARHGEF39-204ENST00000488918 GOLGA6L7A0A1B0GV03 622 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 FAM170AA1A519 330 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 KCNU1A8MYU2 1149 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 TRIM24O15164 1050 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 ZNF217O75362 1048 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 GABBR2O75899 941 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 IGLV3-27P01718 113 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 CALB1P05937 261 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 EPHX1P07099 455 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 TNFAIP3P21580 790 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 LMNB2Q03252 620 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 SRSF5Q13243 272 aaKnown RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 TAF5Q15542 800 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 ARL13BQ3SXY8 428 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 PTPN20Q4JDL3 420 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 ACBD5Q5T8D3 534 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 PIK3R6Q5UE93 754 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 KIAA1324Q6UXG2 1013 aaKnown RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 SLC36A4Q6YBV0 504 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 CHST9Q7L1S5 443 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 DHX40Q8IX18 779 aaKnown RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 FAM217AQ8IXS0 508 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 PHTF2Q8N3S3 785 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 WDTC1Q8N5D0 677 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 LOXL4Q96JB6 756 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 FCRL2Q96LA5 508 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 RPRD1AQ96P16 312 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 SLC2A13Q96QE2 648 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 POLR3BQ9NW08 1133 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 CACNA2D2Q9NY47 1150 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 KIAA1522Q9P206 1035 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 INVSQ9Y283 1065 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 SIK3Q9Y2K2 1263 aa11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 KIF26AQ9ULI4 1882 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-204ENST00000488918 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 AP5Z1O43299 807 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 RNASEH1O60930 286 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 LRP3O75074 770 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 CISD3P0C7P0 127 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 HNRNPLP14866 589 aaKnown RBP eCLIP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 TACR2P21452 398 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 HOXD9P28356 352 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SCNN1AP37088 669 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 GABRB2P47870 512 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 DHPSP49366 369 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 UBASH3AP57075 661 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 CREB5Q02930 508 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SPEM2Q0P670 501 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SFSWAPQ12872 951 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 ZNF177Q13360 481 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 NCAPHQ15003 741 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 ASIC2Q16515 512 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 MS4A13Q5J8X5 152 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 VPS36Q86VN1 386 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SFTPA1Q8IWL2 248 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 MDGA1Q8NFP4 955 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 PRCCQ92733 491 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 ERLEC1Q96DZ1 483 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SELENOOQ9BVL4 669 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 NUCKS1Q9H1E3 243 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 ADAM22Q9P0K1 906 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 SUN2Q9UH99 717 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 FBXO10Q9UK96 956 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 MYO6Q9UM54 1294 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 STON1Q9Y6Q2 735 aa11.6□□□□□ -0.55
ARHGEF39-204ENST00000488918 PRR5-ARHGAP8B1AHC4 643 aa11.59□□□□□ -0.55
ARHGEF39-204ENST00000488918 ASLP04424 464 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms