RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 IL27RAQ6UWB1 636 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 FAM124AQ86V42 546 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 RHBDD1Q8TEB9 315 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 CIPCQ9C0C6 399 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 PCED1AQ9H1Q7 454 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
SNU13-208ENST00000488571 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 PCDHGB2Q9Y5G2 931 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 ACACAQ13085 2346 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 KNL1Q8NG31 2342 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 TP53BP1Q12888 1972 aaPredicted RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 SLC12A8A0AV02 714 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 F13A1P00488 732 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 CYBBP04839 570 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 HLA-FP30511 346 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 RAD23BP54727 409 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 YWHAGP61981 247 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNU13-208ENST00000488571 NFIL3Q16649 462 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 KIF19Q2TAC6 998 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 SERPINA13PQ6UXR4 307 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 INTS8Q75QN2 995 aaKnown RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 ZC3H3Q8IXZ2 948 aaKnown RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 SLC4A11Q8NBS3 891 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 OR2T3Q8NH03 318 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 DDI1Q8WTU0 396 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 HNRNPLLQ8WVV9 542 aaKnown RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 PLD4Q96BZ4 506 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.87□□□□□ -0.51
SNU13-208ENST00000488571 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
SNU13-208ENST00000488571 CABIN1Q9Y6J0 2220 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 TULP2O00295 520 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 TIMM44O43615 452 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 CALUO43852 315 aaPredicted RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 NR2F2P24468 414 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 AFF3P51826 1226 aaKnown RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 ENPEPQ07075 957 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 E2F5Q15329 346 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 TRIP4Q15650 581 aaPredicted RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 PTPRNQ16849 979 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 KCNT1Q5JUK3 1230 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 ARHGAP17Q68EM7 881 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 LAYNQ6UX15 382 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 RSRC2Q7L4I2 434 aaKnown RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 KIAA0907Q7Z7F0 614 aaPredicted RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 CYB5D2Q8WUJ1 264 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 SNX19Q92543 992 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 NDRG1Q92597 394 aaKnown RBP11.86□□□□□ -0.51
SNU13-208ENST00000488571 CDC6Q99741 560 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 ARID3AQ99856 593 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 ORAI3Q9BRQ5 295 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 LHX5Q9H2C1 402 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 MMRN2Q9H8L6 949 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 TMEM8AQ9HCN3 771 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 TM9SF3Q9HD45 589 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 OSGEPQ9NPF4 335 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 CISHQ9NSE2 258 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 STOML2Q9UJZ1 356 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 STRIP2Q9ULQ0 834 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNU13-208ENST00000488571 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 PLXNA2O75051 1894 aa11.86□□□□□ -0.51
SNU13-208ENST00000488571 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 KCNK3O14649 394 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 TSPAN3O60637 253 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 ZBED1O96006 694 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 PFKFB1P16118 471 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
SNU13-208ENST00000488571 GRIA4P48058 902 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 TKTL1P51854 596 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 RPS14P62263 151 aaKnown RBP11.85□□□□□ -0.51
SNU13-208ENST00000488571 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
SNU13-208ENST00000488571 PDE4CQ08493 712 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 PKP1Q13835 747 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 ZCWPW2Q504Y3 356 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 MPPE1Q53F39 396 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 ATL3Q6DD88 541 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 CHST9Q7L1S5 443 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 FMNL3Q8IVF7 1028 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 FAM186BQ8IYM0 893 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNU13-208ENST00000488571 ANKRD52Q8NB46 1076 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 BIRC7Q96CA5 298 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
SNU13-208ENST00000488571 ULBP1Q9BZM6 244 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms