RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 METTL25Q8N6Q8 603 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 GCC1Q96CN9 775 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 REXO5Q96IC2 774 aaKnown RBP4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 RNF26Q9BY78 433 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 CIPCQ9C0C6 399 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 KIF17Q9P2E2 1029 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 GRHPRQ9UBQ7 328 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 DGKBQ9Y6T7 804 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 SMIM35A0A1B0GVV1 85 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 BTBD19C9JJ37 291 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 H7C1Q1 480 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 SEPT4O43236 478 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 SPRY2O43597 315 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 EXOC3O60645 756 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 USP12O75317 370 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 JUPP14923 745 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 PCSK6P29122 969 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 IGHMBP2P38935 993 aaKnown RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 PBX1P40424 430 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 AARSP49588 968 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 DIO1P49895 249 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 RNASELQ05823 741 aaKnown RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 SF3A3Q12874 501 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 AASDHQ4L235 1098 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 CC2D1BQ5T0F9 858 aaKnown RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 ANKRD40Q6AI12 368 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 NAPRTQ6XQN6 538 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 LDHAL6AQ6ZMR3 332 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 CERS3Q8IU89 383 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 C12orf76Q8N812 135 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 ADPRHL1Q8NDY3 354 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 OR52L2PQ8NGH6 319 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 OR6Y1Q8NGX8 325 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 THAP4Q8WY91 577 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 HIC2Q96JB3 615 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 CCDC17Q96LX7 622 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRAPPC9Q96Q05 1148 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 SNX18Q96RF0 628 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 MMS19Q96T76 1030 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 SORBS1Q9BX66 1292 aaKnown RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRSS22Q9GZN4 317 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 TAF1DQ9H5J8 278 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 CCDC134Q9H6E4 229 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRDM8Q9NQV8 689 aa4.26□□□□□ -1.73
HMGB1P36-201ENST00000487709 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 C3orf70A6NLC5 250 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRRT4C9JH25 899 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 CTIFO43310 598 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PIP5K1CO60331 668 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PPP6R2O75170 966 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 ALDOAP04075 364 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 CST5P28325 142 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 SERPINA4P29622 427 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 CCKARP32238 428 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 SLC8A1P32418 973 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 THBS4P35443 961 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PCP4P48539 62 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 CDK7P50613 346 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 RENBPP51606 427 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 JAK3P52333 1124 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 COPB1P53618 953 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 LMAN2Q12907 356 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 MTAPQ13126 283 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 LAMB3Q13751 1172 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 KCNB1Q14721 858 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 GRM4Q14833 912 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 CNGA3Q16281 694 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMEM95Q3KNT9 176 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 TUBB8Q3ZCM7 444 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 WDR93Q6P2C0 686 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PAF1Q8N7H5 531 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 TERB1Q8NA31 727 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 SRFBP1Q8NEF9 429 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 OTUD7AQ8TE49 926 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PAAF1Q9BRP4 392 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PYM1Q9BRP8 204 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 PDGFCQ9NRA1 345 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 WWOXQ9NZC7 414 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 SUFUQ9UMX1 484 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 GTF2A1LQ9UNN4 478 aa4.25□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3DA0A087WVF3 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3IA0A087WXS9 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3EA0A087X179 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3KA0A087X1G2 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3BA6NDS4 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3FA6NER0 549 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MYMKA6NI61 221 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MBD3L5A6NJ08 208 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3LB9A6J9 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRR23D1E9PI22 279 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms