RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ADIPOR2Q86V24 386 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 TTC39CQ8N584 583 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 ANKRD52Q8NB46 1076 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 IGSF8Q969P0 613 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 FAXDC2Q96IV6 333 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 BTBD1Q9H0C5 482 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 ABCB8Q9NUT2 735 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 STOML2Q9UJZ1 356 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 RCOR1Q9UKL0 485 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 CFAP45Q9UL16 551 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 PLA2G4CQ9UP65 541 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 APC2O95996 2303 aa20.3■□□□□ 0.84
SMPDL3A-202ENST00000487215 IGSF10Q6WRI0 2623 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 A0A1B0GVL5 298 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 H0Y8X5 98 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 TULP2O00295 520 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 FSBPO95073 299 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 CD27P26842 260 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 PSMC2P35998 433 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 SLC8A3P57103 927 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 ZNF445P59923 1031 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 DNM1Q05193 864 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 ZBTB16Q05516 673 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 PDE4CQ08493 712 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 KCNT1Q5JUK3 1230 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 KIAA0907Q7Z7F0 614 aaPredicted RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 ZC3H3Q8IXZ2 948 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 AHI1Q8N157 1196 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 FBRSQ9HAH7 460 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 PRSS16Q9NQE7 514 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 OLA1Q9NTK5 396 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 SFMBT1Q9UHJ3 866 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 USP25Q9UHP3 1055 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 GGA2Q9UJY4 613 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 MAPK8IP1Q9UQF2 711 aa20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 HBS1LQ9Y450 684 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 SMG1Q96Q15 3661 aaKnown RBP20.29■□□□□ 0.84
SMPDL3A-202ENST00000487215 PCDHGA12O60330 932 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 DNTTP04053 509 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 PRR29P0C7W0 189 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 PABPC1P11940 636 aaKnown RBP20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 GTF2H1P32780 548 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 SGSHP51688 502 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 SMAD1Q15797 465 aaKnown RBP20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 GOLGA7BQ2TAP0 167 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 CCDC157Q569K6 752 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 TMA16Q96EY4 203 aaKnown RBP20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 ORAI3Q9BRQ5 295 aa20.28■□□□□ 0.84
SMPDL3A-202ENST00000487215 TMEM131Q92545 1883 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 XPO1O14980 1071 aaKnown RBP20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 RHOBTB3O94955 611 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 LATS1O95835 1130 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 DLDP09622 509 aaKnown RBP20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 RPL13P26373 211 aaKnown RBP20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 CTSKP43235 329 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 MXI1P50539 228 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 MCCD1P59942 119 aaPredicted RBP20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 IL9RQ01113 521 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 ADAM9Q13443 819 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 PKP1Q13835 747 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 TTC31Q49AM3 519 aaPredicted RBP20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 ADGRF1Q5T601 910 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 MBLAC2Q68D91 279 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 FBXL13Q8NEE6 735 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 WFDC5Q8TCV5 224 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 RNF139Q8WU17 664 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 EDEM1Q92611 657 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 TATDN2Q93075 761 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 LRRC4Q9HBW1 653 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 SGK2Q9HBY8 427 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 RAB20Q9NX57 234 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 TSPAN16Q9UKR8 245 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 ACACAQ13085 2346 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 NUMA1Q14980 2115 aa20.27■□□□□ 0.84
SMPDL3A-202ENST00000487215 A0A087WV48 116 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 YJEFN3A6XGL0 299 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 E7ENQ6 273 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 MSI1O43347 362 aaKnown RBP20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 IGHV4-34P06331 123 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 CMA1P23946 247 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 BCAT1P54687 386 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 ADIGQ0VDE8 80 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 ZCWPW2Q504Y3 356 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 BSPRYQ5W0U4 402 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 ZNF776Q68DI1 518 aaPredicted RBP20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 DHRS13Q6UX07 377 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 ADAT2Q7Z6V5 191 aaKnown RBP20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 SCUBE3Q8IX30 993 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 GUF1Q8N442 669 aaKnown RBP20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 PDCD7Q8N8D1 485 aaKnown RBP20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 ENGASEQ8NFI3 743 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 CRELD1Q96HD1 420 aa20.26■□□□□ 0.83
SMPDL3A-202ENST00000487215 PAPSS1O43252 624 aaPredicted RBP20.25■□□□□ 0.83
SMPDL3A-202ENST00000487215 ATP5BP06576 529 aaKnown RBP20.25■□□□□ 0.83
SMPDL3A-202ENST00000487215 CD70P32970 193 aa20.25■□□□□ 0.83
SMPDL3A-202ENST00000487215 INAVAQ3KP66 663 aa20.25■□□□□ 0.83
SMPDL3A-202ENST00000487215 KIAA0895LQ68EN5 471 aa20.25■□□□□ 0.83
SMPDL3A-202ENST00000487215 GOLGA1Q92805 767 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms