RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TNFAIP3P21580 790 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CXCR5P32302 372 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 GRK5P34947 590 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 JAK3P52333 1124 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 COPB1P53618 953 aaKnown RBP5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 FOXL2P58012 376 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CHRNDQ07001 517 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 DCTN1Q14203 1278 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF169Q14929 603 aaPredicted RBP5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CTXN3Q4LDR2 81 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF484Q5JVG2 852 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 RETSATQ6NUM9 610 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 BBS12Q6ZW61 710 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 HEATR4Q86WZ0 1026 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 OR52L2PQ8NGH6 319 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 GLMPQ8WWB7 406 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 PDLIM2Q96JY6 352 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 SNX18Q96RF0 628 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 REEP2Q9BRK0 252 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 ELOVL1Q9BW60 279 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 ARHGAP39Q9C0H5 1083 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CDCP1Q9H5V8 836 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 RUSC2Q8N2Y8 1516 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 MBD3L5A6NJ08 208 aaPredicted RBP5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 A6NLC8 198 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 ORC4O43929 436 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 C1RP00736 705 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 DDIT3P35638 169 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 TAS2R50P59544 299 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 MAPK7Q13164 816 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 DDX10Q13206 875 aaKnown RBP5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 ANKRD1Q15327 319 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 AARS2Q5JTZ9 985 aaKnown RBP5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 MAP3K21Q5TCX8 1036 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 WDR93Q6P2C0 686 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 FSIP1Q8NA03 581 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 LINS1Q8NG48 757 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 CLEC4CQ8WTT0 213 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 LARP4BQ92615 738 aaKnown RBP5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 HTRA1Q92743 480 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 HVCN1Q96D96 273 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 MACROD1Q9BQ69 325 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 SLC26A6Q9BXS9 759 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 UBN1Q9NPG3 1134 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 ABHD10Q9NUJ1 306 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 TMLHEQ9NVH6 421 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 PI4KBQ9UBF8 816 aa5.56□□□□□ -1.52
PRPF38A-203ENST00000487160 SEPT4O43236 478 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 EIF5BO60841 1220 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 KAT7O95251 611 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 ADH4P08319 380 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 ADRB1P08588 477 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 APEHP13798 732 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 CPA1P15085 419 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 MATN1P21941 496 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 DUSP1P28562 367 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 LIFRP42702 1097 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 RCAN1P53805 252 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 CYP4F2P78329 520 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 CFHR3Q02985 330 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 TLE3Q04726 772 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 SIM2Q14190 667 aaPredicted RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 HECTD2Q5U5R9 776 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 ATG16L1Q676U5 607 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 KIAA1324Q6UXG2 1013 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 NAPRTQ6XQN6 538 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 KYAT3Q6YP21 454 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 RASAL3Q86YV0 1011 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 PTGR2Q8N8N7 351 aaPredicted RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 MAFAQ8NHW3 353 aaPredicted RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 SLC2A12Q8TD20 617 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 ARRDC3Q96B67 414 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 RBM17Q96I25 401 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 KAZALD1Q96I82 304 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 PIGSQ96S52 555 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 MMS19Q96T76 1030 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 HERC2P3Q9BVR0 1158 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 CIPCQ9C0C6 399 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 FZD4Q9ULV1 537 aa5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 PRG4Q92954 1404 aaPredicted RBP5.55□□□□□ -1.52
PRPF38A-203ENST00000487160 VWA3AA6NCI4 1184 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF213O14771 459 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 FYB1O15117 783 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 HNRNPRO43390 633 aaKnown RBP5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 EXOC3O60645 756 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 RHOBTB3O94955 611 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 CSF1P09603 554 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 ATP1A3P13637 1013 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 CHN1P15882 459 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 DRD4P21917 467 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 MCM7P33993 719 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 PCP4P48539 62 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 RARRES1P49788 294 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 AGTR2P50052 363 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 VAMP2P63027 116 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 MPP1Q00013 466 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms