RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CCNL2Q96S94 520 aaPredicted RBP8.89□□□□□ -0.99
APTX-228ENST00000486724 TCHPQ9BT92 498 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 MRPL4Q9BYD3 311 aaKnown RBP8.89□□□□□ -0.99
APTX-228ENST00000486724 MKRN2Q9H000 416 aaKnown RBP8.89□□□□□ -0.99
APTX-228ENST00000486724 SLC25A18Q9H1K4 315 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 CBX8Q9HC52 389 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 OLFML3Q9NRN5 406 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 PANK4Q9NVE7 773 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 TBC1D14Q9P2M4 693 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 SEL1LQ9UBV2 794 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 UBQLN1Q9UMX0 589 aaKnown RBP8.89□□□□□ -0.99
APTX-228ENST00000486724 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.89□□□□□ -0.99
APTX-228ENST00000486724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.99
APTX-228ENST00000486724 PDZD2O15018 2839 aa8.89□□□□□ -0.99
APTX-228ENST00000486724 A0A087WUV0 522 aaPredicted RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 GOLGA6L19H0YKK7 550 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 XPOTO43592 962 aaKnown RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 HIP1RO75146 1068 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 FAM13AO94988 1023 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 ACADMP11310 421 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 PROZP22891 400 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 ACP1P24666 158 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 GRIK1P39086 918 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CORO7P57737 925 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 SLC7A9P82251 487 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 MYL5Q02045 173 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 SPAG1Q07617 926 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 MAPK7Q13164 816 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 NFE2Q16621 373 aaPredicted RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 DDR2Q16832 855 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 GRAMD4Q6IC98 578 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 MPZL3Q6UWV2 235 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 USP53Q70EK8 1073 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 DDX42Q86XP3 938 aaKnown RBP eCLIP8.88□□□□□ -0.99
APTX-228ENST00000486724 SMYD4Q8IYR2 804 aaPredicted RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 AOPEPQ8N6M6 819 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 KIAA0895Q8NCT3 520 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CCDC150Q8NCX0 1101 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CACTINQ8WUQ7 758 aaKnown RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 SCFD1Q8WVM8 642 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 OTUB2Q96DC9 234 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 SGF29Q96ES7 293 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 SIPA1Q96FS4 1042 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 ACE2Q9BYF1 805 aaPredicted RBP8.88□□□□□ -0.99
APTX-228ENST00000486724 PARVGQ9HBI0 331 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CFAP97Q9P2B7 532 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 CPQQ9Y646 472 aa8.88□□□□□ -0.99
APTX-228ENST00000486724 UBE4BO95155 1302 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ABLIM1O14639 778 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 PSMA7O14818 248 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 PPEF2O14830 753 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 PPP1R12AO14974 1030 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 VILLO15195 856 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 CXCL8P10145 99 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 MAPTP10636 758 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 SKILP12757 684 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 CD27P26842 260 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 EPHA8P29322 1005 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 RBMS1P29558 406 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 OAS2P29728 719 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 PRCPP42785 496 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ZNF132P52740 706 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 TSPY1Q01534 308 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 STK4Q13043 487 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 PAK1Q13153 545 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 CLN3Q13286 438 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 NCAPHQ15003 741 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 BRD3Q15059 726 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ZBTB6Q15916 424 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 LUZP1Q86V48 1076 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 SFR1Q86XK3 245 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 DAW1Q8N136 415 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 GUF1Q8N442 669 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 NEK11Q8NG66 645 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ZNF564Q8TBZ8 553 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 PRCCQ92733 491 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 KIFAP3Q92845 792 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 HPS3Q969F9 1004 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 DHTKD1Q96HY7 919 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 TARS2Q9BW92 718 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 ACBD3Q9H3P7 528 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 C6orf106Q9H6K1 298 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 C17orf75Q9HAS0 396 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 PLEKHA5Q9HAU0 1116 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ARFGAP3Q9NP61 516 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 DNAJC17Q9NVM6 304 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 LARSQ9P2J5 1176 aaKnown RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 RWDD2AQ9UIY3 292 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 ATXN7L1Q9ULK2 861 aaPredicted RBP8.87□□□□□ -0.99
APTX-228ENST00000486724 CTNND2Q9UQB3 1225 aa8.87□□□□□ -0.99
APTX-228ENST00000486724 GOLGA6L9A6NEM1 432 aa8.86□□□□□ -0.99
APTX-228ENST00000486724 BECN2A8MW95 431 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms