RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZSCAN23Q3MJ62 389 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 KIAA0895LQ68EN5 471 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 LRRC52Q8N7C0 313 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 C4orf32Q8N8J7 132 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 IGSF22Q8N9C0 903 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 PDZD8Q8NEN9 1154 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 MYCBPAPQ8TBZ2 947 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 SNX29Q8TEQ0 813 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 SORCS1Q8WY21 1168 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 BHMTQ93088 406 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 FBXO32Q969P5 355 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 PIWIL1Q96J94 861 aaKnown RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 FAM84AQ96KN4 292 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ERVMER34-1Q9H9K5 563 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 GDF3Q9NR23 364 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ORC3Q9UBD5 711 aaPredicted RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 PLEKHB1Q9UF11 243 aaPredicted RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 CHORDC1Q9UHD1 332 aaPredicted RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 SATB2Q9UPW6 733 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 NME7Q9Y5B8 376 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 PP2D1A8MPX8 630 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 H0YCG3 227 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 PENKP01210 267 aaPredicted RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 PLCG1P19174 1290 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 CD38P28907 300 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 RPS14P62263 151 aaKnown RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 IFRD2Q12894 506 aaPredicted RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 ZNF211Q13398 564 aaPredicted RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 KCNJ12Q14500 433 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 ZNF174Q15697 407 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 SGO2Q562F6 1265 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 C3orf38Q5JPI3 329 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 FYB2Q5VWT5 728 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 TMEM215Q68D42 235 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 CLEC14AQ86T13 490 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 NT5DC4Q86YG4 428 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 SGF29Q96ES7 293 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 MMTAG2Q9BU76 263 aaKnown RBP8.7□□□□□ -1.02
XRN1-212ENST00000486211 SGK2Q9HBY8 427 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 LRRC4CQ9HCJ2 640 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 ELOVL2Q9NXB9 296 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 SIX4Q9UIU6 781 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 STYXL1Q9Y6J8 313 aa8.7□□□□□ -1.02
XRN1-212ENST00000486211 CACNA1DQ01668 2161 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 A0A1B0GVM2 712 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 FAM92AA1XBS5 289 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 FIGNL2A6NMB9 653 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 PPFIA2O75334 1257 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 CDC45O75419 566 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 IL18RAPO95256 599 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 TBX18O95935 607 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 RBMS1P29558 406 aaKnown RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 AFMP43652 599 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 INHBCP55103 352 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 PTSQ03393 145 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 ZBTB16Q05516 673 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 SRSF6Q13247 344 aaKnown RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 ORC2Q13416 577 aaPredicted RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 EIF4HQ15056 248 aaKnown RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 SKIDA1Q1XH10 827 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 ISXQ2M1V0 245 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 BMP2KLQ5H9B9 411 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 MDH1BQ5I0G3 518 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 PPP1R26Q5T8A7 1209 aaPredicted RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 SERPINA13PQ6UXR4 307 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 NUP93Q8N1F7 819 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 SLC25A45Q8N413 288 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 SCAMP5Q8TAC9 235 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 UCMAQ8WVF2 138 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 WASF1Q92558 559 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 SKA1Q96BD8 255 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 KCTD15Q96SI1 283 aaPredicted RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 FIZ1Q96SL8 496 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 SLC25A18Q9H1K4 315 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 TMEM245Q9H330 911 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■■■■ 115.4
XRN1-212ENST00000486211 AASDHPPTQ9NRN7 309 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 LARSQ9P2J5 1176 aaKnown RBP8.69□□□□□ -1.02
XRN1-212ENST00000486211 CLEC4EQ9ULY5 219 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 PCDHGA8Q9Y5G5 932 aa8.69□□□□□ -1.02
XRN1-212ENST00000486211 LY6G6EA0A0G2JKS1 128 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 TLR4O00206 839 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 NOBOXO60393 691 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 TLR5O60602 858 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 PFKFB2O60825 505 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 SDC3O75056 442 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 RTN3O95197 1032 aaPredicted RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 GIMD1P0DJR0 217 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 CKMT1AP12532 417 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms