RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 CST5P28325 142 aaPredicted RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 THBS4P35443 961 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 ADD2P35612 726 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 GSTM5P46439 218 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 TUBA4AP68366 448 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 SF3A3Q12874 501 aaKnown RBP eCLIP3.74□□□□□ -1.811e-6■□□□□ 8.6
SENP6-208ENST00000483859 PDCLQ13371 301 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 RAPGEF1Q13905 1077 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 CSHL1Q14406 222 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 FAM187BQ17R55 369 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 PLAC9Q5JTB6 97 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 AARS2Q5JTZ9 985 aaKnown RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 KIAA1614Q5VZ46 1190 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 ANKRD40Q6AI12 368 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 KIAA1324Q6UXG2 1013 aaKnown RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 DLK2Q6UY11 383 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 WDR53Q7Z5U6 358 aaPredicted RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 SAMD14Q8IZD0 417 aaPredicted RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 PNPLA1Q8N8W4 532 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 MAFAQ8NHW3 353 aaPredicted RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 CLEC4CQ8WTT0 213 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 TRMT61AQ96FX7 289 aaKnown RBP3.74□□□□□ -1.81
SENP6-208ENST00000483859 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 TIMP4Q99727 224 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 FAM167BQ9BTA0 163 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 PAGR1Q9BTK6 254 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 HERC2P3Q9BVR0 1158 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 ELOVL1Q9BW60 279 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 ABHD16BQ9H3Z7 469 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 USP29Q9HBJ7 922 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 RRN3Q9NYV6 651 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 GGA3Q9NZ52 723 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.74□□□□□ -1.81
SENP6-208ENST00000483859 BTBD3Q9Y2F9 522 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 ENTPD2Q9Y5L3 495 aa3.74□□□□□ -1.81
SENP6-208ENST00000483859 FAM90A20PA6NIJ5 464 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 AGAP5A6NIR3 686 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 FYB1O15117 783 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 KRT38O76015 456 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 TMIGD3P0DMS9 266 aaPredicted RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 FOXL2P58012 376 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 RPL15P61313 204 aaKnown RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 SEMA3BQ13214 749 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 ST3GAL2Q16842 350 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 AAK1Q2M2I8 961 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 FCRLBQ6BAA4 426 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 KYAT3Q6YP21 454 aaKnown RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 SYT13Q7L8C5 426 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 KRT27Q7Z3Y8 459 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 RAB11FIP4Q86YS3 637 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 CPOQ8IVL8 374 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 HERC6Q8IVU3 1022 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 CCDC117Q8IWD4 279 aaPredicted RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 FTSJ3Q8IY81 847 aaKnown RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 NRSN1Q8IZ57 195 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 TERB1Q8NA31 727 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 SMRP1Q8NCR6 262 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 HMGB4Q8WW32 186 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 C3orf49Q96BT1 292 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 LTV1Q96GA3 475 aaPredicted RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 SNX18Q96RF0 628 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 TAF1DQ9H5J8 278 aaPredicted RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 CCDC134Q9H6E4 229 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 ELAC1Q9H777 363 aaKnown RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 KCNK9Q9NPC2 374 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 ABHD10Q9NUJ1 306 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 FLRT1Q9NZU1 646 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 SH3BP4Q9P0V3 963 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 TRPC5Q9UL62 973 aaPredicted RBP3.73□□□□□ -1.81
SENP6-208ENST00000483859 ZBTB1Q9Y2K1 713 aa3.73□□□□□ -1.81
SENP6-208ENST00000483859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 CCDC151A5D8V7 595 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 EIF3FO00303 357 aaPredicted RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 TMPRSS11DO60235 418 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 DLDP09622 509 aaKnown RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 SNHG28P0DPA3 235 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 MYCLP12524 364 aaPredicted RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 IGHMBP2P38935 993 aaKnown RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 TXNL4AP83876 142 aaKnown RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 RNASELQ05823 741 aaKnown RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 PPFIA1Q13136 1202 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 SLC14A1Q13336 389 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 SEC23BQ15437 767 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 ATPAF1Q5TC12 328 aaPredicted RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 ACSM6Q6P461 480 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 NFRKBQ6P4R8 1299 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 SYNE3Q6ZMZ3 975 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 SFTPA1Q8IWL2 248 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 CPXCR1Q8N123 301 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 C12orf76Q8N812 135 aaPredicted RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 AFG1LQ8WV93 481 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 RUBCNQ92622 972 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 GCC1Q96CN9 775 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 VPS50Q96JG6 964 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 UBXN10Q96LJ8 280 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 QTRT1Q9BXR0 403 aaKnown RBP3.72□□□□□ -1.81
SENP6-208ENST00000483859 CDCP1Q9H5V8 836 aa3.72□□□□□ -1.81
SENP6-208ENST00000483859 RMI1Q9H9A7 625 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms