RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 BNIP3Q12983 259 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 KCNJ12Q14500 433 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 E2F5Q15329 346 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 E2F4Q16254 413 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 TBC1D25Q3MII6 688 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 TADA2BQ86TJ2 420 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 UNC93AQ86WB7 457 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 FAM217AQ8IXS0 508 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 FAM181AQ8N9Y4 354 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 NAF1Q96HR8 494 aaKnown RBP11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 ARID3AQ99856 593 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 CPNE5Q9HCH3 593 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 PNPLA8Q9NP80 782 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 ABCB8Q9NUT2 735 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 KBTBD4Q9NVX7 518 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 MARCH2Q9P0N8 246 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 PLA2G4CQ9UP65 541 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 USP3Q9Y6I4 520 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 PTPN13Q12923 2485 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 A0A1W2PR77 199 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 SLC12A8A0AV02 714 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 GLDCP23378 1020 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 CASP1P29466 404 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 ACTN2P35609 894 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 ASIC1P78348 528 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 INSM1Q01101 510 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 LY6DQ14210 128 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 RABEP1Q15276 862 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 TTC31Q49AM3 519 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 MPPE1Q53F39 396 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 SFMBT2Q5VUG0 894 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 ZNF776Q68DI1 518 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 NCEH1Q6PIU2 408 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 KANSL1Q7Z3B3 1105 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 KIAA0907Q7Z7F0 614 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 DCBLD1Q8N8Z6 715 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 WFDC5Q8TCV5 224 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 GANCQ8TET4 914 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 LGMNQ99538 433 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 RSPH9Q9H1X1 276 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 TNMDQ9H2S6 317 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 PABPC3Q9H361 631 aaKnown RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 CLMPQ9H6B4 373 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 AASDHPPTQ9NRN7 309 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 CLCA2Q9UQC9 943 aa11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 UBR5O95071 2799 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-205ENST00000483847 UBE4BO95155 1302 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 CAPN8A6NHC0 703 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 C10orf142B7Z368 130 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 ARHGAP6O43182 974 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 STX6O43752 255 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 ASS1P00966 412 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 KRT10P13645 584 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 P4HA1P13674 534 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 CD38P28907 300 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 SGSHP51688 502 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 AP3M2P53677 418 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 SNRPFP62306 86 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 EHHADHQ08426 723 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 ZACNQ401N2 412 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 PPP1R26Q5T8A7 1209 aaPredicted RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 ARHGAP40Q5TG30 622 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 MBLAC2Q68D91 279 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 KDM7AQ6ZMT4 941 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 NDRG1Q92597 394 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 DUSP16Q9BY84 665 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 FBRSQ9HAH7 460 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 GDF3Q9NR23 364 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 FBXL12Q9NXK8 326 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 TFIP11Q9UBB9 837 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 GGA2Q9UJY4 613 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 PCDHB1Q9Y5F3 818 aa11.35□□□□□ -0.59
SMARCC1-205ENST00000483847 COL12A1Q99715 3063 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 A0A1W2PP55 124 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 B8ZZF3 427 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 MID1O15344 667 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 SIN3BO75182 1162 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 PABPC1P11940 636 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 CKMT2P17540 419 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 CD58P19256 250 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 CD70P32970 193 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 ARRB1P49407 418 aaPredicted RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 NXPH1P58417 271 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 YWHAGP61981 247 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 PDE4CQ08493 712 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 C1orf220Q5T0J3 134 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 USP30Q70CQ3 517 aa11.34□□□□□ -0.59
SMARCC1-205ENST00000483847 SV2AQ7L0J3 742 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms