RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 KIAA0895Q8NCT3 520 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 TAS1R2Q8TE23 839 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 TMEM174Q8WUU8 243 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 FOXD4L4Q8WXT5 416 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 NDRG1Q92597 394 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 IGSF8Q969P0 613 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 TMA16Q96EY4 203 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PAGE5Q96GU1 130 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 IMPG2Q9BZV3 1241 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 DNAI2Q9GZS0 605 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 BTBD1Q9H0C5 482 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 TMEM245Q9H330 911 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 OSGEPQ9NPF4 335 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PRSS16Q9NQE7 514 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 EXOC1Q9NV70 894 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 SERTAD1Q9UHV2 236 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PCDHA7Q9UN72 937 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 FRMD4BQ9Y2L6 1034 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 LAMA5O15230 3695 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 ACACAQ13085 2346 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 IGSF10Q6WRI0 2623 aa7.71□□□□□ -1.17
CSDE1-206ENST00000483030 FAM47DPA6NHR8 397 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PLK4O00444 970 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 GPR37O15354 613 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 DNTTP04053 509 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PRB1P04280 392 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 SLFN14P0C7P3 912 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 TRIM49P0CI25 452 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 TRIM49CP0CI26 452 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 JUPP14923 745 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ITPKBP27987 946 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 HOXD9P28356 352 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-206ENST00000483030 HLA-FP30511 346 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 CTSKP43235 329 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ME1P48163 572 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 HARS2P49590 506 aaKnown RBP7.71□□□□□ -1.18
CSDE1-206ENST00000483030 TKTL1P51854 596 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PPP3CAQ08209 521 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 TRIP4Q15650 581 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ADIPOR2Q86V24 386 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 GATAD2AQ86YP4 633 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 FMNL3Q8IVF7 1028 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 FAM217AQ8IXS0 508 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 CCDC150Q8NCX0 1101 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ENGASEQ8NFI3 743 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PIP4K2CQ8TBX8 421 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 GANCQ8TET4 914 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PLD4Q96BZ4 506 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ORAI3Q9BRQ5 295 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 UBXN6Q9BZV1 441 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 MTG2Q9H4K7 406 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 MMRN2Q9H8L6 949 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 ABCB8Q9NUT2 735 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 FTSJ1Q9UET6 329 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 SFMBT1Q9UHJ3 866 aa7.71□□□□□ -1.18
CSDE1-206ENST00000483030 PLXNB3Q9ULL4 1909 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 A0A1B0GTQ1 180 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CBX4O00257 560 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 TULP2O00295 520 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ACTN4O43707 911 aaKnown RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CALUO43852 315 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 DFNA5O60443 496 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ZBED1O96006 694 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 IGHV4-34P06331 123 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ATP5BP06576 529 aaKnown RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 DLDP09622 509 aaKnown RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 PABPC1P11940 636 aaKnown RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ABCG1P45844 678 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 BCAT1P54687 386 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 RAD23BP54727 409 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 CLDN6P56747 220 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 C21orf59P57076 290 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 SLC8A3P57103 927 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 SEMG2Q02383 582 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ZBTB16Q05516 673 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 INAVAQ3KP66 663 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 RAB41Q5JT25 222 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ADGRF1Q5T601 910 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 RESP18Q5W5W9 173 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 MBLAC2Q68D91 279 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 KIAA0895LQ68EN5 471 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 PM20D1Q6GTS8 502 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 KIAA0907Q7Z7F0 614 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 TMPRSS12Q86WS5 348 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ZC3H3Q8IXZ2 948 aaKnown RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ANKRD52Q8NB46 1076 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 SLC4A11Q8NBS3 891 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 WFIKKN2Q8TEU8 576 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 RNF139Q8WU17 664 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 EDEM1Q92611 657 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 SEMA4DQ92854 862 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 TMEM176AQ96HP8 235 aa7.7□□□□□ -1.18
CSDE1-206ENST00000483030 UBL7Q96S82 380 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ACE2Q9BYF1 805 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-206ENST00000483030 ULBP1Q9BZM6 244 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms