RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 LGR5O75473 907 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 ERCC2P18074 760 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 TCN1P20061 433 aaPredicted RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 PCSK1P29120 753 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 IQSEC1Q6DN90 963 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 SLC44A1Q8WWI5 657 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 OXNAD1Q96HP4 312 aaPredicted RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 PGLYRP2Q96PD5 576 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 EBNA1BP2Q99848 306 aaKnown RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 VANGL2Q9ULK5 521 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 TPP1O14773 563 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 LUC7L3O95232 432 aaKnown RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 MT-CO1P00395 513 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALD1-220ENST00000482470 NPR3P17342 541 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 EDNRBP24530 442 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 OR1G1P47890 313 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 OLIG2Q13516 323 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 ARFGAP1Q8N6T3 406 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 KCTD15Q96SI1 283 aaPredicted RBP9.4□□□□□ -0.9
CALD1-220ENST00000482470 KCNK16Q96T55 309 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 TKTL2Q9H0I9 626 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 ARL8BQ9NVJ2 186 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 EFR3BQ9Y2G0 817 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 NRCAMQ92823 1304 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 RREB1Q92766 1687 aa9.4□□□□□ -0.9
CALD1-220ENST00000482470 A0A0A0MRY4 1105 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 MFSD11O43934 449 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 SMIM24O75264 130 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 DARSP14868 501 aaKnown RBP9.4□□□□□ -0.91
CALD1-220ENST00000482470 HDAC4P56524 1084 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 KPNB1Q14974 876 aaKnown RBP9.4□□□□□ -0.91
CALD1-220ENST00000482470 SNX17Q15036 470 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 PPM1JQ5JR12 505 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 RASIP1Q5U651 963 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.91
CALD1-220ENST00000482470 TFAP2DQ7Z6R9 452 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 SPATA13Q96N96 652 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 GBP5Q96PP8 586 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 ZNF670Q9BS34 389 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 CHST12Q9NRB3 414 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 RGS17Q9UGC6 210 aaPredicted RBP9.4□□□□□ -0.91
CALD1-220ENST00000482470 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
CALD1-220ENST00000482470 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 PRPF4O43172 522 aaKnown RBP eCLIP9.39□□□□□ -0.913e-7■■■■□ 23.9
CALD1-220ENST00000482470 PHGDHO43175 533 aaKnown RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 RALBP11234 206 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 PMLP29590 882 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 SOX11P35716 441 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 HIC1Q14526 733 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 UNC93AQ86WB7 457 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NIPA2Q8N8Q9 360 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 GABPB2Q8TAK5 448 aaPredicted RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 GTF3C2Q8WUA4 911 aaPredicted RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 DNAJC9Q8WXX5 260 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 WNT8BQ93098 351 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 BCO2Q9BYV7 579 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NMUR2Q9GZQ4 415 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CCDC68Q9H2F9 335 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 IPPQ9Y573 584 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 GIPC1O14908 333 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 BNIP3LO60238 219 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 UPP2O95045 317 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 ENO3P13929 434 aaPredicted RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 SERPINB5P36952 375 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CASP2P42575 452 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MATKP42679 507 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 PRAMEP78395 509 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CDK16Q00536 496 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 ENPEPQ07075 957 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MGAT5Q09328 741 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 SLC12A1Q13621 1099 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 PDCD2Q16342 344 aaPredicted RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 SDHAF4Q5VUM1 108 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CLNKQ7Z7G1 428 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 SPATA6LQ8N4H0 392 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 ELMO2Q96JJ3 720 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MAML3Q96JK9 1138 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 APBA2Q99767 749 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 LRRC40Q9H9A6 602 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CAB39LQ9H9S4 337 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 POPDC2Q9HBU9 364 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 SLC38A7Q9NVC3 462 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NVLO15381 856 aaKnown RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 GLRA3O75311 464 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CSH1P0DML2 217 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CSH2P0DML3 217 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CPB1P15086 417 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CPA3P15088 417 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NOS2P35228 1153 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms