RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 KRT10P13645 584 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PTPN2P17706 415 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 FSTP19883 344 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 IL1R2P27930 398 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 EFNA5P52803 228 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 KIAA2012Q0VF49 1180 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 TFCP2Q12800 502 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 GPR68Q15743 365 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 NAA16Q6N069 864 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 GIMAP7Q8NHV1 300 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SMCR8Q8TEV9 937 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 LINC00615Q96LM1 132 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 G6PC3Q9BUM1 346 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 METTL22Q9BUU2 404 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 CPEB1Q9BZB8 566 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 KLHL4Q9C0H6 718 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 CYP4F11Q9HBI6 524 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SEMA3GQ9NS98 782 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PI4KBQ9UBF8 816 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 FAM90A7PA6NKC0 464 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 A8MV72 311 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 FAM90A22PA8MWA6 464 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FAM90A12PA8MX19 464 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FAM90A23PA8MXZ1 464 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 BTBD18B2RXH4 712 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 H3BS24 57 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GTPBP1O00178 669 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 SMPD2O60906 423 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 RPP40O75818 363 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 BAG2O95816 211 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 ANXA6P08133 673 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 MMP10P09238 476 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 HSD17B4P51659 736 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 STARD6P59095 220 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 CYP4A11Q02928 519 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 IFT88Q13099 833 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SLC5A9Q2M3M2 681 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 IRGCQ6NXR0 463 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FIBINQ8TAL6 211 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 PANK1Q8TE04 598 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 KCNN1Q92952 543 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 ERVK-5Q9HDB9 667 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 KCTD5Q9NXV2 234 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 WSB2Q9NYS7 404 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 GPRC5DQ9NZD1 345 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 VSX1Q9NZR4 365 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 AKAP7Q9P0M2 348 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 ASH2LQ9UBL3 628 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 HDAC6Q9UBN7 1215 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FETUBQ9UGM5 382 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FBXL5Q9UKA1 691 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 TRANK1O15050 2925 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GNAT3A8MTJ3 354 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 PIAS2O75928 621 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GZMAP12544 262 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 TFEBP19484 476 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 THPOP40225 353 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 NAP1L1P55209 391 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 EPS8Q12929 822 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 CYP27C1Q4G0S4 372 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 IYDQ6PHW0 289 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 INO80CQ6PI98 192 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 TMC5Q6UXY8 1006 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FRMD1Q8N878 549 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 ZBTB44Q8NCP5 570 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GDAP1Q8TB36 358 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SHKBP1Q8TBC3 707 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 ASCC2Q9H1I8 757 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 EPB41L4AQ9HCS5 686 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 STK26Q9P289 416 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 TRPS1Q9UHF7 1281 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FAM184BQ9ULE4 1060 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 CNTN6Q9UQ52 1028 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GOLGB1Q14789 3259 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 A0A1W2PQM1 296 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 A0A1W2PR48 441 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 YDJCA8MPS7 323 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 M0QYT0 321 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SGSM2O43147 1006 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 PROM1O43490 865 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 CBFA2T3O75081 653 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 CEACAM5P06731 702 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 GAP43P17677 238 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 AGAP20933 346 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 UCP3P55916 312 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SESN2P58004 480 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 KIAA1324Q6UXG2 1013 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 PROSER1Q86XN7 944 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FAM217AQ8IXS0 508 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 PLD5Q8N7P1 536 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 RAPGEF4Q8WZA2 1011 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 MR1Q95460 341 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 UBE2FQ969M7 185 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 MTFMTQ96DP5 389 aaKnown RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 TIGD1Q96MW7 591 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 JMJD8Q96S16 334 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 FOXB1Q99853 325 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms