RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	TTC34	A8MYJ7	566 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	NDST3	O95803	873 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	IGKV3-20	P01619	116 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLC3A2	P08195	630 aa	Known RBP	3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	HOXB2	P14652	356 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	NDUFS1	P28331	727 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	STT3A	P46977	705 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	PRIM2	P49643	509 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	PGGT1B	P53609	377 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	PTGR1	Q14914	329 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	NFATC4	Q14934	902 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	NUGGC	Q68CJ6	796 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	DGKH	Q86XP1	1220 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	UEVLD	Q8IX04	471 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	FBXL14	Q8N1E6	418 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	ATP2A3	Q93084	1043 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	GJA10	Q969M2	543 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	TTC17	Q96AE7	1141 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	P2RY11	Q96G91	374 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	SENP7	Q9BQF6	1050 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	SELENON	Q9NZV5	590 aa		3.75	□□□□□ -1.81
CCNL1-223	ENST00000481173	TRBV5-3	A0A0A0MS03	114 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	CLCA1	A8K7I4	914 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173		M0QZQ0	153 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	APOL1	O14791	398 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	KCNQ3	O43525	872 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	TLX3	O43711	291 aa	Predicted RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	USP12	O75317	370 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	FGF3	P11487	239 aa	Predicted RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MYL4	P12829	197 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLC5A1	P13866	664 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	PECAM1	P16284	738 aa	Predicted RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	TSHR	P16473	764 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MST1	P26927	711 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	STAT6	P42226	847 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	GSTM5	P46439	218 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	SOX2	P48431	317 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	ZNF84	P51523	738 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	CASP5	P51878	434 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLC12A2	P55011	1212 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	COBLL1	Q53SF7	1204 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	C9orf50	Q5SZB4	431 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	ATG9B	Q674R7	924 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MRNIP	Q6NTE8	343 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	CCDC144NL	Q6NUI1	221 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	DHRS13	Q6UX07	377 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	GSG1L	Q6UXU4	331 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	PIK3AP1	Q6ZUJ8	805 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	ZNF329	Q86UD4	541 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	CUZD1	Q86UP6	607 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	ARL14EP	Q8N8R7	260 aa	Predicted RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	BCAS4	Q8TDM0	211 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	WFIKKN2	Q8TEU8	576 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	GRAMD1A	Q96CP6	724 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MSI2	Q96DH6	328 aa	Known RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MED30	Q96HR3	178 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLITRK1	Q96PX8	696 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	EIF3C	Q99613	913 aa	Known RBP	3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	TUBB6	Q9BUF5	446 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	TTLL2	Q9BWV7	592 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	AAMDC	Q9H7C9	122 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MYO1A	Q9UBC5	1043 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	PCDHA12	Q9UN75	941 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173	MAN2B2	Q9Y2E5	1009 aa		3.74	□□□□□ -1.81
CCNL1-223	ENST00000481173		A0A087WYN8	130 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173		F8W810	466 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	GRID2	O43424	1007 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	ZC3H11A	O75152	810 aa	Known RBP eCLIP	3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	CAMTA2	O94983	1202 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	SRGAP2B	P0DMP2	458 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	TFEB	P19484	476 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	MMP8	P22894	467 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	GABRB3	P28472	473 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	ATP1A4	Q13733	1029 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	ACSM6	Q6P461	480 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	BEND5	Q7L4P6	421 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	RHPN2	Q8IUC4	686 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	SPATA2L	Q8IUW3	424 aa	Predicted RBP	3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	TXLNB	Q8N3L3	684 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLC44A5	Q8NCS7	719 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	OR52L2P	Q8NGH6	319 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	OIT3	Q8WWZ8	545 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	SNX27	Q96L92	541 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	NTPCR	Q9BSD7	190 aa	Known RBP	3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	ELOVL1	Q9BW60	279 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	IPO11	Q9UI26	975 aa	Known RBP	3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173	ANAPC4	Q9UJX5	808 aa		3.73	□□□□□ -1.81
CCNL1-223	ENST00000481173		A0A1W2PPC4	97 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	APAF1	O14727	1248 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	ACOT8	O14734	319 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	ENO1	P06733	434 aa	Known RBP	3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	MYL3	P08590	195 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	HARS	P12081	509 aa	Known RBP	3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	MATN1	P21941	496 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	SLC8A1	P32418	973 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	POLD2	P49005	469 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	PGM5	Q15124	567 aa		3.72	□□□□□ -1.81
CCNL1-223	ENST00000481173	ARL13B	Q3SXY8	428 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms