RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF366Q8N895 744 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 LMO3Q8TAP4 145 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 WFIKKN2Q8TEU8 576 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 IRGQQ8WZA9 623 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 MIR1-1HGQ9H1L0 117 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 ABCB8Q9NUT2 735 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 USP36Q9P275 1121 aaKnown RBP15.88■□□□□ 0.13
LIMS3-203ENST00000480744 GGA2Q9UJY4 613 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 GOLGA6L7A0A1B0GV03 622 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 KCNJ18B7U540 433 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 P4HA2O15460 535 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 TBL1XO60907 577 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
LIMS3-203ENST00000480744 KRT5P13647 590 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 OXTRP30559 389 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 SLC11A2P49281 568 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 SGSHP51688 502 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 COPAP53621 1224 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 TBX4P57082 545 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 SIM1P81133 766 aaPredicted RBP15.87■□□□□ 0.13
LIMS3-203ENST00000480744 SEMA3BQ13214 749 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 MORC3Q14149 939 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 ZCCHC9Q8N567 271 aaKnown RBP15.87■□□□□ 0.13
LIMS3-203ENST00000480744 EHBP1Q8NDI1 1231 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 HSFY1Q96LI6 401 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 INTS2Q9H0H0 1204 aaKnown RBP15.87■□□□□ 0.13
LIMS3-203ENST00000480744 ST7Q9NRC1 585 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 STOML2Q9UJZ1 356 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 PLA2G4CQ9UP65 541 aa15.87■□□□□ 0.13
LIMS3-203ENST00000480744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.87■□□□□ 0.13
LIMS3-203ENST00000480744 C1QTNF9BB2RNN3 333 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 FBXO21O94952 628 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 GNA14O95837 355 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 AFPP02771 609 aaKnown RBP15.86■□□□□ 0.13
LIMS3-203ENST00000480744 C1QTNF9P0C862 333 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 PABPC1P11940 636 aaKnown RBP15.86■□□□□ 0.13
LIMS3-203ENST00000480744 GCNT1Q02742 428 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 PAK1Q13153 545 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 DCAF12L1Q5VU92 463 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 NUGGCQ68CJ6 796 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 MBLAC2Q68D91 279 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 PIP4P1Q86T03 277 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 TRIM59Q8IWR1 403 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 UNC45BQ8IWX7 931 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 AHI1Q8N157 1196 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 OR2T3Q8NH03 318 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 FAM149B1Q96BN6 582 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 KREMEN1Q96MU8 473 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
LIMS3-203ENST00000480744 STIM2Q9P246 746 aa15.86■□□□□ 0.13
LIMS3-203ENST00000480744 NYNRINQ9P2P1 1898 aaKnown RBP15.85■□□□□ 0.13
LIMS3-203ENST00000480744 A0A1B0GTW7 788 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 ACSL4O60488 711 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 IGLV3-27P01718 113 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 SLC6A4P31645 630 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 CD70P32970 193 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 GRIK2Q13002 908 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 PIK3R6Q5UE93 754 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 FOXR2Q6PJQ5 311 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 UNQ6494/PRO21346Q6UXR6 183 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 ADIPOR2Q86V24 386 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 CREBRFQ8IUR6 639 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 CADM4Q8NFZ8 388 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 ADAM32Q8TC27 787 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 WFDC5Q8TCV5 224 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 DQX1Q8TE96 717 aaKnown RBP15.85■□□□□ 0.13
LIMS3-203ENST00000480744 SNX19Q92543 992 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 NUP58Q9BVL2 599 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 SCNM1Q9BWG6 230 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 ADAM33Q9BZ11 813 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
LIMS3-203ENST00000480744 TMEM131Q92545 1883 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 FRYQ5TBA9 3013 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 TP53BP1Q12888 1972 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 TYW5A2RUC4 315 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 METTL12A8MUP2 240 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 UPK3BL1B0FP48 263 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 UPK3BL2E5RIL1 263 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 HYAL3O43820 417 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 MOCS2O96007 188 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 ATP5BP06576 529 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 PROS1P07225 676 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 CD59P13987 128 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 POLR2EP19388 210 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 RING1Q06587 406 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 CAMK2GQ13555 558 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 NADSYN1Q6IA69 706 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 MFN1Q8IWA4 741 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 SCUBE3Q8IX30 993 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 HJURPQ8NCD3 748 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 DNASE2BQ8WZ79 361 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 SERPINB11Q96P15 392 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 DDX50Q9BQ39 737 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 TMEM245Q9H330 911 aa15.84■□□□□ 0.13
LIMS3-203ENST00000480744 UBE2TQ9NPD8 197 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 DNAAF2Q9NVR5 837 aaKnown RBP15.84■□□□□ 0.13
LIMS3-203ENST00000480744 EIF2B4Q9UI10 523 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms