RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 AGKQ53H12 422 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 YME1L1Q96TA2 773 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 SPON1Q9HCB6 807 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 POLD4Q9HCU8 107 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CABIN1Q9Y6J0 2220 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TBKBP1A7MCY6 615 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 IL12RB1P42701 662 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FUT11Q495W5 492 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CDC42EP5Q6NZY7 148 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CACTIN-AS1Q8N1I8 211 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF614Q8N883 585 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF483Q8TF39 744 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 VCPIP1Q96JH7 1222 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 QKIQ96PU8 341 aaKnown RBP eCLIP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CPNE1Q99829 537 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ATAD3AQ9NVI7 634 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 HS6ST1O60243 411 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 SCTRP47872 440 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FAM172AQ8WUF8 416 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PI4K2AQ9BTU6 479 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PSME2Q9UL46 239 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TNFAIP8O95379 198 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FAM58BPP0C7Q3 252 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CPA3P15088 417 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CCNA2P20248 432 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 SMIM11AP58511 58 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ANGEL2Q5VTE6 544 aaKnown RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 DLG3Q92796 817 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 KCNB2Q92953 911 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 C6orf62Q9GZU0 229 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PLAGL2Q9UPG8 496 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CD151P48509 253 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 GRIK3Q13003 919 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 MPP3Q13368 585 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 DGUOKQ16854 277 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PRR5LQ6MZQ0 368 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 BHLHB9Q6PI77 547 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 LZTR1Q8N653 840 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 JCADQ9P266 1359 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TCF7P36402 384 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CTXN3Q4LDR2 81 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 SPANXN3Q5MJ09 141 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 MMADHCQ9H3L0 296 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 OSGEPL1Q9H4B0 414 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 RIBC2Q9H4K1 309 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 THP07101 528 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ITGB6P18564 788 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 AKAP5P24588 427 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CCR1P32246 355 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 SLC44A2Q8IWA5 706 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TRIOBPQ9H2D6 2365 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 C2CD2LO14523 706 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 EPN2O95208 641 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 VAV1P15498 845 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PAX3P23760 479 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ATP12AP54707 1039 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 EFEMP1Q12805 493 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CYB5D1Q6P9G0 228 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FAM220AQ7Z4H9 259 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 UBA3Q8TBC4 463 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM159Q96B96 161 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 BBS4Q96RK4 519 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 L2HGDHQ9H9P8 463 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 NT5MQ9NPB1 228 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM216Q9P0N5 145 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF112Q9UJU3 913 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PNPLA6Q8IY17 1366 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 A0A087WXM4 84 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 DNALI1O14645 258 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-212ENST00000480614 CYP2A13Q16696 494 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TMC5Q6UXY8 1006 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 DENND6AQ8IWF6 608 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 FICDQ9BVA6 458 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 GGT7Q9UJ14 662 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 NCF1BA6NI72 391 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 NCF1CA8MVU1 366 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ANKRD65E5RJM6 399 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 UBDO15205 165 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TPST1O60507 370 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CYP1A1P04798 512 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 NCF1P14598 390 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ZCCHC7Q8N3Z6 543 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LRRC71Q8N4P6 559 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 POMGNT2Q8NAT1 580 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SGF29Q96ES7 293 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TRAPPC9Q96Q05 1148 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CNTNAP4Q9C0A0 1308 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SPTBN1Q01082 2364 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms