RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PJA1Q8NG27 643 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 TTC8Q8TAM2 541 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 NUP85Q9BW27 656 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 LACRTQ9GZZ8 138 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 KCNF1Q9H3M0 494 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 EBF3Q9H4W6 596 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
TRA2B-212ENST00000480461 GTSE1Q9NYZ3 720 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 SIT1Q9Y3P8 196 aa12.71□□□□□ -0.37
TRA2B-212ENST00000480461 TRDMT1O14717 391 aaKnown RBP12.7□□□□□ -0.38
TRA2B-212ENST00000480461 CCP110O43303 1012 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 TCF4P15884 667 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 SDHBP21912 280 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 SLC6A4P31645 630 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 CYLC1P35663 651 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-212ENST00000480461 DEUP1Q05D60 604 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 NNTQ13423 1086 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 TCEAL1Q15170 157 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 CDO1Q16878 200 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 FAM133BQ5BKY9 247 aaKnown RBP12.7□□□□□ -0.38
TRA2B-212ENST00000480461 C10orf76Q5T2E6 689 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 DCUN1D2Q6PH85 259 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRA2B-212ENST00000480461 FAM217AQ8IXS0 508 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 PLD4Q96BZ4 506 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 TRIM11Q96F44 468 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 SERPINB11Q96P15 392 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 PPP1R9BQ96SB3 815 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 CNPY3Q9BT09 278 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 RRN3Q9NYV6 651 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 STOML2Q9UJZ1 356 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 INTUQ9ULD6 942 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 SNX10Q9Y5X0 201 aa12.7□□□□□ -0.38
TRA2B-212ENST00000480461 CACNA1IQ9P0X4 2223 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 SDC4P31431 198 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 GBP1P32455 592 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 SGSHP51688 502 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 KPNA1P52294 538 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 PPP2R5DQ14738 602 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 SPA17Q15506 151 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 ARHGAP29Q52LW3 1261 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 NAIF1Q69YI7 327 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 RFWD3Q6PCD5 774 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 CYP4V2Q6ZWL3 525 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 STRADAQ7RTN6 431 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 C14orf80Q86SX3 495 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 FAM131BQ86XD5 332 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 FAM172AQ8WUF8 416 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 CTNNBL1Q8WYA6 563 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 PRMT1Q99873 361 aaKnown RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 FOXQ1Q9C009 403 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 BRD9Q9H8M2 597 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 MRPL47Q9HD33 250 aaKnown RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 SLC2A4RGQ9NR83 387 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 THG1LQ9NWX6 298 aaKnown RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 ARHGEF38Q9NXL2 777 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 CTTNBP2NLQ9P2B4 639 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 STAP1Q9ULZ2 295 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 COL4A3Q01955 1670 aa12.69□□□□□ -0.38
TRA2B-212ENST00000480461 NUP210Q8TEM1 1887 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-212ENST00000480461 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 PJA2O43164 708 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 ACSL4O60488 711 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 PAGE1O75459 146 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 MTA2O94776 668 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 F9P00740 461 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 CYP17A1P05093 508 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 PSMA2P25787 234 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 CCR1P32246 355 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 ADRA1BP35368 520 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 SOX9P48436 509 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 HARS2P49590 506 aaKnown RBP12.68□□□□□ -0.38
TRA2B-212ENST00000480461 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
TRA2B-212ENST00000480461 MESP2Q0VG99 397 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 RUNX3Q13761 415 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 DHCR24Q15392 516 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 LY6G5CQ5SRR4 150 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 ADGRF1Q5T601 910 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 PIK3R6Q5UE93 754 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 TXNRD3NBQ6F5E7 133 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
TRA2B-212ENST00000480461 UNC45BQ8IWX7 931 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
TRA2B-212ENST00000480461 CCDC185Q8N715 623 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms