RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 CMTM8Q8IZV2 173 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.67□□□□□ -0.06
RPP40-205ENST00000479782 CSPG4P5Q96PW8 444 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 SLC22A12Q96S37 553 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 SLC46A2Q9BY10 475 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 HOMER3Q9NSC5 361 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 SMARCAL1Q9NZC9 954 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 CWC15Q9P013 229 aaKnown RBP14.67□□□□□ -0.06
RPP40-205ENST00000479782 CHD7Q9P2D1 2997 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 MRPS23Q9Y3D9 190 aaKnown RBP14.67□□□□□ -0.06
RPP40-205ENST00000479782 CPQQ9Y646 472 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 HS3ST4Q9Y661 456 aa14.67□□□□□ -0.06
RPP40-205ENST00000479782 RIOK3O14730 519 aaKnown RBP14.66□□□□□ -0.06
RPP40-205ENST00000479782 CREB3O43889 395 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 KRT10P13645 584 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 GOT1P17174 413 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 WEE1P30291 646 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 HOXC13P31276 330 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 TPI1P60174 286 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 TUBB4BP68371 445 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 NTHL1P78549 312 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 MS4A13Q5J8X5 152 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 PIK3R6Q5UE93 754 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 MANEALQ5VSG8 457 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 KAZNQ674X7 775 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 SLC9A4Q6AI14 798 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 SYCE2Q6PIF2 218 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 TTC13Q8NBP0 860 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 SPATA4Q8NEY3 305 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 DDX50Q9BQ39 737 aaKnown RBP14.66□□□□□ -0.06
RPP40-205ENST00000479782 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 CARD6Q9BX69 1037 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 HEMGNQ9BXL5 484 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 FRMD8P1Q9BZ68 369 aaPredicted RBP14.66□□□□□ -0.06
RPP40-205ENST00000479782 MAGEB5Q9BZ81 275 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 ADAM7Q9H2U9 754 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 SLITRK6Q9H5Y7 841 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 STIM2Q9P246 746 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 LSM7Q9UK45 103 aaKnown RBP14.66□□□□□ -0.06
RPP40-205ENST00000479782 ARHGAP26Q9UNA1 814 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 ZNF510Q9Y2H8 683 aa14.66□□□□□ -0.06
RPP40-205ENST00000479782 RANBP2P49792 3224 aaKnown RBP14.66□□□□□ -0.06
RPP40-205ENST00000479782 NUP210Q8TEM1 1887 aaPredicted RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 LAMA2P24043 3122 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 FAM72CH0Y354 149 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 APOL1O14791 398 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 FGF10O15520 208 aaPredicted RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 DAPK3O43293 454 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 ACSL4O60488 711 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CST8O60676 142 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 LRIG2O94898 1065 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 APOC2P02655 101 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 TCF3P15923 654 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CEBPBP17676 345 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 TGM2P21980 687 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 IGFBP4P22692 258 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 FSHRP23945 695 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CORO1AP31146 461 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 DPYSQ14117 519 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 FAM72AQ5TYM5 149 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 FAM72DQ6L9T8 149 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 FAM72BQ86X60 149 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 C12orf50Q8NA57 414 aaPredicted RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 PCDH19Q8TAB3 1148 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 TBC1D31Q96DN5 1066 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 PABPC5Q96DU9 382 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 LRCH3Q96II8 777 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 PRMT1Q99873 361 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 ARHGEF4Q9NR80 690 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 GKN1Q9NS71 199 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 SMPD4Q9NXE4 827 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CLDND1Q9NY35 253 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 CLEC1BQ9P126 229 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 PPARGC1AQ9UBK2 798 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 XPO7Q9UIA9 1087 aaKnown RBP14.65□□□□□ -0.06
RPP40-205ENST00000479782 STOML2Q9UJZ1 356 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 TRANK1O15050 2925 aa14.65□□□□□ -0.06
RPP40-205ENST00000479782 TCRBV7S2A1N4TA0A589 114 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 E9PAM4 449 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 PHF2O75151 1096 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 TBX10O75333 385 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 IRF1P10914 325 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 EPHB2P29323 1055 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 ADCY2Q08462 1091 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 AUHQ13825 339 aaKnown RBP14.64□□□□□ -0.07
RPP40-205ENST00000479782 LLGL1Q15334 1064 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 SIX1Q15475 284 aaPredicted RBP14.64□□□□□ -0.07
RPP40-205ENST00000479782 CYP1B1Q16678 543 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 ATAT1Q5SQI0 421 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 Q6ZNB5 142 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 HTR3DQ70Z44 454 aa14.64□□□□□ -0.07
RPP40-205ENST00000479782 ADAT2Q7Z6V5 191 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms