RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	EFHC1	Q5JVL4	640 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PIK3R6	Q5UE93	754 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CHST9	Q7L1S5	443 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	METTL3	Q86U44	580 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	TMPRSS6	Q8IU80	811 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FRMD1	Q8N878	549 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DQX1	Q8TE96	717 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SHC3	Q92529	594 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PRCC	Q92733	491 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FOXJ1	Q92949	421 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	RNF34	Q969K3	372 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SIPA1	Q96FS4	1042 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PPP1R13B	Q96KQ4	1090 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	TMEM9B	Q9NQ34	198 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	RXFP3	Q9NSD7	469 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ABCB8	Q9NUT2	735 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	STIM2	Q9P246	746 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	EVL	Q9UI08	416 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	GGA2	Q9UJY4	613 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DNAJC12	Q9UKB3	198 aa		12.8	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MYO16	Q9Y6X6	1858 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	LNP1	A1A4G5	178 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	C4orf47	A7E2U8	309 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584		E5RJQ4	531 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CFI	P05156	583 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	GLI1	P08151	1106 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PABPC1	P11940	636 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	GNS	P15586	552 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CD6	P30203	668 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	IL12RB1	P42701	662 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ST8SIA6	P61647	398 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	IRX4	P78413	519 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	GFPT1	Q06210	699 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ZNF33A	Q06730	810 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MTA1	Q13330	715 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PDCL	Q13371	301 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ENPP2	Q13822	863 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DPCR1	Q3MIW9	517 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DCAF6	Q58WW2	860 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	WDR45B	Q5MNZ6	344 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	RFWD3	Q6PCD5	774 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CLEC17A	Q6ZS10	378 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MFN1	Q8IWA4	741 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	RGL4	Q8IZJ4	473 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DEFB119	Q8N690	84 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	P2RY11	Q96G91	374 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	LSM14B	Q9BX40	385 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	LHX5	Q9H2C1	402 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ITM2C	Q9NQX7	267 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	TJP2	Q9UDY2	1190 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SUN2	Q9UH99	717 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PILRB	Q9UKJ0	227 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CLEC4E	Q9ULY5	219 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PCDHGC3	Q9UN70	934 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SLC6A14	Q9UN76	642 aa		12.79	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SPAG17	Q6Q759	2223 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	GOLGA6L7	A0A1B0GV03	622 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	BECN2	A8MW95	431 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	KCNJ18	B7U540	433 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FOXN3	O00409	490 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	PAPSS1	O43252	624 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MOCS3	O95396	460 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	TRUB2	O95900	331 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MOCS2	O96007	188 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FYN	P06241	537 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DLD	P09622	509 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ABCB4	P21439	1286 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ITPKA	P23677	461 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	EEF1G	P26641	437 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	HLA-F	P30511	346 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CDH18	Q13634	790 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	KCNJ12	Q14500	433 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	HSP90AA4P	Q58FG1	418 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SYPL2	Q5VXT5	272 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	MBLAC2	Q68D91	279 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SLC23A3	Q6PIS1	610 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ATP6V0D2	Q8N8Y2	350 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FIBIN	Q8TAL6	211 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ADAM32	Q8TC27	787 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SORCS1	Q8WY21	1168 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	BTN2A3P	Q96KV6	586 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FCRL2	Q96LA5	508 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	HSPA12B	Q96MM6	686 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	NUP58	Q9BVL2	599 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SLC6A17	Q9H1V8	727 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FAM204A	Q9H8W3	233 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	FBRS	Q9HAH7	460 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	CD248	Q9HCU0	757 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	ACP6	Q9NPH0	428 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	SUSD2	Q9UGT4	822 aa		12.78	□□□□□ -0.36
CDK5RAP2-211	ENST00000479584	NCOR2	Q9Y618	2525 aa		12.77	□□□□□ -0.37
CDK5RAP2-211	ENST00000479584	PATE3	B3GLJ2	98 aa		12.77	□□□□□ -0.37
CDK5RAP2-211	ENST00000479584		H0Y626	953 aa		12.77	□□□□□ -0.37
CDK5RAP2-211	ENST00000479584	TM4SF5	O14894	197 aa		12.77	□□□□□ -0.37
CDK5RAP2-211	ENST00000479584	HSF2BP	O75031	334 aa		12.77	□□□□□ -0.37
CDK5RAP2-211	ENST00000479584	ASL	P04424	464 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms