RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 RABEPKQ7Z6M1 372 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 RGL4Q8IZJ4 473 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 SMARCE1Q969G3 411 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 OTUB2Q96DC9 234 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 KCNK16Q96T55 309 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 NCAPGQ9BPX3 1015 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 MKRN2Q9H000 416 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 XYLT2Q9H1B5 865 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 TMEM8AQ9HCN3 771 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.98□□□□□ -1.292e-7■■□□□ 12
VCP-205ENST00000479300 TLR8Q9NR97 1041 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 KRT82Q9NSB4 513 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 DNAJC17Q9NVM6 304 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 WSB2Q9NYS7 404 aaPredicted RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 IL37Q9NZH6 218 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 GMIPQ9P107 970 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 APOBEC2Q9Y235 224 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 PCDHB9Q9Y5E1 797 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 TMEM131Q92545 1883 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 MYO18BQ8IUG5 2567 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CABIN1Q9Y6J0 2220 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 NUMA1Q14980 2115 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 A0A1B0GTW7 788 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 FAM92AA1XBS5 289 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 NEDD8-MDP1E9PL57 170 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 VNN1O95497 513 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 ASS1P00966 412 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 ZNF883P0CG24 379 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 TRIM49P0CI25 452 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 TRIM49CP0CI26 452 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 IRF1P10914 325 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 RALAP11233 206 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CCDC130P13994 396 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 H2AFXP16104 143 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 CD58P19256 250 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CD6P30203 668 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 ATP5C1P36542 298 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 MXI1P50539 228 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SLC5A3P53794 718 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CETN1Q12798 172 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PTPRNQ16849 979 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 HLA-BQ31612 363 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 EDRF1Q3B7T1 1238 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 FUT11Q495W5 492 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 DCAF17Q5H9S7 520 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 KCNT1Q5JUK3 1230 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 ZNF658Q5TYW1 1059 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 GRAMD4Q6IC98 578 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SPOPLQ6IQ16 392 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SDE2Q6IQ49 451 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PCSK4Q6UW60 755 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 KIAA1324Q6UXG2 1013 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 TRMT11Q7Z4G4 463 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 SCUBE3Q8IX30 993 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CHPFQ8IZ52 775 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CRYBG2Q8N1P7 616 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 RBBP8NLQ8NC74 664 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 FBXL13Q8NEE6 735 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 ZMIZ2Q8NF64 920 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PLEKHO2Q8TD55 490 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SLC2A14Q8TDB8 520 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SETD7Q8WTS6 366 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 JAKMIP2Q96AA8 810 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 ELMO3Q96BJ8 720 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CYFIP2Q96F07 1278 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 TOE1Q96GM8 510 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 FAXDC2Q96IV6 333 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 HEXIM2Q96MH2 286 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 GSDMAQ96QA5 445 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 CDK5RAP1Q96SZ6 601 aaKnown RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 EPAS1Q99814 870 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 GPR174Q9BXC1 333 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 KLF16Q9BXK1 252 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 FAM124BQ9H5Z6 455 aaPredicted RBP6.97□□□□□ -1.29
VCP-205ENST00000479300 GAREM1Q9H706 876 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PRDM16Q9HAZ2 1276 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 TM7SF3Q9NS93 570 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 FAM49BQ9NUQ9 324 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 OSER1Q9NX31 292 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PSD3Q9NYI0 1048 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 MARK1Q9P0L2 795 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 RSPH14Q9UHP6 348 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 PCDHA5Q9Y5H7 936 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 RAI2Q9Y5P3 530 aa6.97□□□□□ -1.29
VCP-205ENST00000479300 A0A1B0GVT2 93 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 GOLGA8CPA6NN73 597 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 METTL12A8MUP2 240 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 KCNK3O14649 394 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PSMA7O14818 248 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TLX3O43711 291 aaPredicted RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 NDUFS2O75306 463 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 BEST1O76090 585 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 SLU7O95391 586 aaKnown RBP6.96□□□□□ -1.3
VCP-205ENST00000479300 NCAM1P13591 858 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 PLA2G2AP14555 144 aa6.96□□□□□ -1.3
VCP-205ENST00000479300 TYRP14679 529 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms