RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 GCC1Q96CN9 775 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 LENG8Q96PV6 779 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 KRTAP1-5Q9BYS1 174 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZCWPW1Q9H0M4 648 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 HELLSQ9NRZ9 838 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 TMOD4Q9NZQ9 345 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DNAJB11Q9UBS4 358 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DENND4BO75064 1496 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF518AQ6AHZ1 1483 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 TTBK1Q5TCY1 1321 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 PLCH2O75038 1416 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 CEP162Q5TB80 1403 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 AKNAQ7Z591 1439 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 H7C1Q1 480 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 AP4M1O00189 453 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 NPHP1O15259 732 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 RGS10O43665 173 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ASNA1O43681 348 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 BCAR3O75815 825 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 NTSR2O95665 410 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 CYP2A6P11509 494 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 FPR3P25089 353 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ARL4CP56559 192 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 E2F1Q01094 437 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ATP1A4Q13733 1029 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 PRKG1Q13976 671 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 CCNIQ14094 377 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF268Q14587 947 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 PTCHD3Q3KNS1 767 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 LIN54Q6MZP7 749 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 SHC4Q6S5L8 630 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 RFX8Q6ZV50 586 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ANKRD18AQ8IVF6 992 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 MBD3L2Q8NHZ7 208 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 RSC1A1Q92681 617 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 FAM118BQ9BPY3 351 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 PAGR1Q9BTK6 254 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 SLC25A32Q9H2D1 315 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 TP63Q9H3D4 680 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 TFCP2L1Q9NZI6 479 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 AFG3L2Q9Y4W6 797 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF142P52746 1687 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZC3H13Q5T200 1668 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 FAM135AQ9P2D6 1515 aa4.66□□□□□ -1.66
CDC42BPA-212ENST00000478573 PLXNC1O60486 1568 aa4.65□□□□□ -1.66
CDC42BPA-212ENST00000478573 ARHGEF5Q12774 1597 aa4.65□□□□□ -1.66
CDC42BPA-212ENST00000478573 EIF2AK4Q9P2K8 1649 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-212ENST00000478573 C3P01024 1663 aa4.65□□□□□ -1.66
CDC42BPA-212ENST00000478573 PLEKHH2Q8IVE3 1493 aa4.65□□□□□ -1.66
CDC42BPA-212ENST00000478573 E5RJQ4 531 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 PCDH17O14917 1159 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 DHHO43323 396 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 TNFRSF6BO95407 300 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 ITGA2BP08514 1039 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SNHG28P0DPA3 235 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 LAMB3Q13751 1172 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 POSTNQ15063 836 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 ABLIM2Q6H8Q1 611 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 JMJD6Q6NYC1 403 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 CAND1Q86VP6 1230 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 GALNT15Q8N3T1 639 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 OTUD7AQ8TE49 926 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SOCS4Q8WXH5 440 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 TRIM63Q969Q1 353 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SNX18Q96RF0 628 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 PRPF18Q99633 342 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 EFHD1Q9BUP0 239 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SORBS1Q9BX66 1292 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 GBA2Q9HCG7 927 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SAGE1Q9NXZ1 904 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 HERC5Q9UII4 1024 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 AGLP35573 1532 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 SYCP2Q9BX26 1530 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 MAST1Q9Y2H9 1570 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 COL15A1P39059 1388 aa4.65□□□□□ -1.67
CDC42BPA-212ENST00000478573 ATP7AQ04656 1500 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 ARHGEF12Q9NZN5 1544 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 M0R3H8 397 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 IPO5O00410 1097 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 SOCS2O14508 198 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 ADAM10O14672 748 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 DSCR3O14972 297 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 CCNT2O60583 730 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 GCATO75600 419 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 CHRM5P08912 532 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 HGFP14210 728 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 EPHA3P29320 983 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 TKTP29401 623 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 PRKAR1BP31321 381 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 UQCRC1P31930 480 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 FOXG1P55316 489 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 GPS1Q13098 491 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 LY6KQ17RY6 165 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 ALFQ53S48 1182 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZNF517Q6ZMY9 492 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 ABRAQ8N0Z2 381 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 NRACQ8N912 160 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms