RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ADGRF1Q5T601 910 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 FYB2Q5VWT5 728 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RAP1GAP2Q684P5 730 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 FAM217AQ8IXS0 508 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DTWD2Q8NBA8 298 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 C3orf20Q8ND61 904 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 OR8K1Q8NGG5 319 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DDI1Q8WTU0 396 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RXFP2Q8WXD0 754 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CLDN23Q96B33 292 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 MYEOVQ96EZ4 313 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 PRICKLE1Q96MT3 831 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 MCEEQ96PE7 176 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 PNKPQ96T60 521 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DNAJC7Q99615 494 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RAB6CQ9H0N0 254 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 ABHD10Q9NUJ1 306 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 SPATA6Q9NWH7 488 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 STOML2Q9UJZ1 356 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CLEC4EQ9ULY5 219 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 BZW2Q9Y6E2 419 aaKnown RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DENND4CQ5VZ89 1909 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 TICRRQ7Z2Z1 1910 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 KIF26AQ9ULI4 1882 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 A0A087X0T9 212 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 C2CD4BA6NLJ0 364 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 AKR1B15C9JRZ8 316 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 GFRA2O00451 464 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 CACNG3O60359 315 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 KAT7O95251 611 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 APODP05090 189 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 FAM228BP0C875 321 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 COL9A1P20849 921 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ABCB4P21439 1286 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 SDC4P31431 198 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 HNRNPH3P31942 346 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 RDXP35241 583 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 EIF4A3P38919 411 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 RPS9P46781 194 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 TBX2Q13207 712 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 CCDC14Q49A88 953 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 MPPE1Q53F39 396 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 DGKKQ5KSL6 1271 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 SH3PXD2AQ5TCZ1 1133 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 GRAMD4Q6IC98 578 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 PKN3Q6P5Z2 889 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 WDR59Q6PJI9 974 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ADGRD1Q6QNK2 874 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 VPS36Q86VN1 386 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 CHSY1Q86X52 802 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 FAM131BQ86XD5 332 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 PHTF2Q8N3S3 785 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ATP6V0D2Q8N8Y2 350 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 EXOC4Q96A65 974 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ZNF653Q96CK0 615 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 BTN2A3PQ96KV6 586 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 XPO6Q96QU8 1125 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ANP32EQ9BTT0 268 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 CHRDQ9H2X0 955 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 POLR3BQ9NW08 1133 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
HDAC6-222ENST00000478095 C2orf42Q9NWW7 574 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 RRN3Q9NYV6 651 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 STIM2Q9P246 746 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 DEC1Q9P2X7 70 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 SNX10Q9Y5X0 201 aa10.65□□□□□ -0.7
HDAC6-222ENST00000478095 ZDBF2Q9HCK1 2354 aa10.65□□□□□ -0.71
HDAC6-222ENST00000478095 TBC1D3BA6NDS4 549 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 SIGLEC16A6NMB1 481 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 KCNU1A8MYU2 1149 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 I6L893 689 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-222ENST00000478095 K7EQS6 105 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 TK2O00142 265 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 CCP110O43303 1012 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 TBL1XO60907 577 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 RTN2O75298 545 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 ADCY5O95622 1261 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 SLC2A3P11169 496 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 GZMAP12544 262 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 TACR2P21452 398 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 GPD1P21695 349 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 HOXD9P28356 352 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-222ENST00000478095 EIF2DP41214 584 aaKnown RBP10.64□□□□□ -0.71
HDAC6-222ENST00000478095 GRIA2P42262 883 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 DGKGP49619 791 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 CXCR3P49682 368 aa10.64□□□□□ -0.71
HDAC6-222ENST00000478095 RPS24P62847 133 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms