RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LSM8O95777 96 aaKnown RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 TRUB2O95900 331 aaKnown RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 APOC2P02655 101 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 CYP2C8P10632 490 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 INSRRP14616 1297 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 HDCP19113 662 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 SULT1E1P49888 294 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 TAP1Q03518 808 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 MED21Q13503 144 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 PITRM1Q5JRX3 1037 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 EFHC2Q5JST6 749 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 ZNF618Q5T7W0 954 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 XYLT1Q86Y38 959 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 GDPD5Q8WTR4 605 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 OSMRQ99650 979 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 MRPL45Q9BRJ2 306 aaKnown RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 CCDC134Q9H6E4 229 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 RNF181Q9P0P0 153 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 HBP1O60381 514 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 ATG7O95352 703 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 STAMBPO95630 424 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 ITGAVP06756 1048 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 CTSHP09668 335 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 GSTT1P30711 240 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 COPAP53621 1224 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 AQP4P55087 323 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 IRF9Q00978 393 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 TBL3Q12788 808 aaKnown RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 POU6F1Q14863 301 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 CNGA3Q16281 694 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMC1-209ENST00000477739 STRA8Q7Z7C7 330 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 NAT8LQ8N9F0 302 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 SLC7A14Q8TBB6 771 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 DENND1AQ8TEH3 1009 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 LRGUKQ96M69 825 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 PANX3Q96QZ0 392 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 GPR20Q99678 358 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 TRIM8Q9BZR9 551 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 LRRC4Q9HBW1 653 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 AP4E1Q9UPM8 1137 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 SCAMP3O14828 347 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 PMPCBO75439 489 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PIGRP01833 764 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 MT-ND1P03886 318 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CCNB1P14635 433 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 MCL1Q07820 350 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PRPSAP1Q14558 356 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PDK1Q15118 436 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CELF3Q5SZQ8 465 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 PDPK2PQ6A1A2 396 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 BBS12Q6ZW61 710 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CCDC185Q8N715 623 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PLD5Q8N7P1 536 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PCDH19Q8TAB3 1148 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CHST12Q9NRB3 414 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 IARS2Q9NSE4 1012 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 CPA4Q9UI42 421 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 AURKCQ9UQB9 309 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 M0QYT0 321 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 CHRNGP07510 517 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 MX2P20592 715 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 CLDN10P78369 228 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SATB1Q01826 763 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ZNF280DQ6N043 979 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SATL1Q86VE3 508 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.04□□□□□ -0.8
CMC1-209ENST00000477739 GPC2Q8N158 579 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 IPMKQ8NFU5 416 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SLC35B2Q8TB61 432 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SLCO2A1Q92959 643 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PHF21BQ96EK2 531 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 MFSD3Q96ES6 412 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 PRPF18Q99633 342 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 SH3GL3Q99963 347 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 TRPV6Q9H1D0 765 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 TMEM216Q9P0N5 145 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 RGS17Q9UGC6 210 aaPredicted RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 CPSF3Q9UKF6 684 aaKnown RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 ARHGAP26Q9UNA1 814 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 LRCH1Q9Y2L9 728 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 SIGLEC16A6NMB1 481 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 TMEM233B4DJY2 109 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
CMC1-209ENST00000477739 APOEP02649 317 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 NDUFV1P49821 464 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 NAGLUP54802 743 aa10.04□□□□□ -0.8
CMC1-209ENST00000477739 ADGRD1Q6QNK2 874 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms