RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 EDEM1Q92611 657 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TRIM31Q9BZY9 425 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 FNIP2Q9P278 1114 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 PPARGC1AQ9UBK2 798 aaKnown RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 PCDHB5Q9Y5E4 795 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TADA2AO75478 443 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SOAT2O75908 522 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SUN1O94901 812 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 CSRP3P50461 194 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 IRAK1P51617 712 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SLC29A2Q14542 456 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TRIP13Q15645 432 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 LILRA6Q6PI73 481 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TDRPQ86YL5 185 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 RFX6Q8HWS3 928 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SPATA2LQ8IUW3 424 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SLC7A14Q8TBB6 771 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 LRRC45Q96CN5 670 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 HDAC11Q96DB2 347 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TSGA13Q96PP4 275 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 NDFIP2Q9NV92 336 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 STAP1Q9ULZ2 295 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 LRIG2O94898 1065 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 GAS8O95995 478 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 F9P00740 461 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 RBP3P10745 1247 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 MSLNQ13421 630 aaPredicted RBP12.53□□□□□ -0.4
PRPF39-203ENST00000477626 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 CTXN3Q4LDR2 81 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 AGBL2Q5U5Z8 902 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 MCUQ8NE86 351 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 EIF2B3Q9NR50 452 aaKnown RBP12.53□□□□□ -0.4
PRPF39-203ENST00000477626 GMIPQ9P107 970 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 HS3ST4Q9Y661 456 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 NCAM1P13591 858 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 TPSB2P20231 275 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 TUBP50607 506 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 ZXDBP98169 803 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 RAB33AQ14088 237 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 TPSAB1Q15661 275 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 SDHAF4Q5VUM1 108 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 PPIL6Q8IXY8 311 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 ATF2P15336 505 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
PRPF39-203ENST00000477626 DYNLT1P63172 113 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 RING1Q06587 406 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 AUHQ13825 339 aaKnown RBP12.53□□□□□ -0.4
PRPF39-203ENST00000477626 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 MAML1Q92585 1016 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
PRPF39-203ENST00000477626 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 FAM193AP78312 1265 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 STEAP4Q687X5 459 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 C14orf80Q86SX3 495 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 BBOF1Q8ND07 529 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 ATP6V1G3Q96LB4 118 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 TKTL2Q9H0I9 626 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 DHX35Q9H5Z1 703 aaKnown RBP12.52□□□□□ -0.4
PRPF39-203ENST00000477626 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.4
PRPF39-203ENST00000477626 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRPF39-203ENST00000477626 OAS1P00973 400 aaKnown RBP12.52□□□□□ -0.41
PRPF39-203ENST00000477626 TSHRP16473 764 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 GYS2P54840 703 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 SLC8A3P57103 927 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
PRPF39-203ENST00000477626 GPS1Q13098 491 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 POTEHQ6S545 545 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 P3H4Q92791 437 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 IRAK3Q9Y616 596 aa12.52□□□□□ -0.41
PRPF39-203ENST00000477626 SLC38A8A6NNN8 435 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 SMAPO00193 183 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 ERCC2P18074 760 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 CBX1P83916 185 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 CAMK1Q14012 370 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 TRIP4Q15650 581 aaPredicted RBP12.51□□□□□ -0.41
PRPF39-203ENST00000477626 C1orf228Q6PIY5 440 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 ARNTL2Q8WYA1 636 aa12.51□□□□□ -0.41
PRPF39-203ENST00000477626 IGSF9Q9P2J2 1179 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms