RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 STX11O75558 287 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SOAT2O75908 522 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 KRT6AP02538 564 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 POU1F1P28069 291 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SFNP31947 248 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 GEMIN4P57678 1058 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CDK16Q00536 496 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF618Q5T7W0 954 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TRIQKQ629K1 86 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 KDELC2Q7Z4H8 507 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ULK2Q8IYT8 1036 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 RBM15BQ8NDT2 890 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FAM172AQ8WUF8 416 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ROGDIQ9GZN7 287 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 IL1RL2Q9HB29 575 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TNS3Q68CZ2 1445 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TRPC5OSA6NMA1 111 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 AKAP3O75969 853 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 GSTM1P09488 218 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CLTBP09497 229 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 HALP42357 657 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CASP5P51878 434 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 COPAP53621 1224 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 MYLK3Q32MK0 819 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM110Q86TL2 294 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 RCOR2Q8IZ40 523 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CD101Q93033 1021 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 E2F7Q96AV8 911 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SERPINB7O75635 380 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 POLBP06746 335 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 PDGFRAP16234 1089 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ADRA1DP25100 572 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 PRELPP51888 382 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 HADHBP55084 474 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 STX4Q12846 297 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 NCOA4Q13772 614 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TYW3Q6IPR3 259 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 Q6ZNX1 250 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM179Q6ZVK1 233 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ATG4AQ8WYN0 398 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM120AQ9BXJ8 343 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SENP6Q9GZR1 1112 aaPredicted RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CHST7Q9NS84 486 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FAM25AB3EWG3 89 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FAM25CB3EWG5 89 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FAM25GB3EWG6 89 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 MTSS1O43312 755 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 CLPTM1O96005 669 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 IFNA14P01570 189 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 MYL3P08590 195 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 WEE2P0C1S8 567 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 HPGDP15428 266 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 ITGA1P56199 1179 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 TAB1Q15750 504 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 KYAT1Q16773 422 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 DHDDSQ86SQ9 333 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 KRT73Q86Y46 540 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SLC35C1Q96A29 364 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 FRMD8Q9BZ67 464 aaPredicted RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 REXO4Q9GZR2 422 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 VTA1Q9NP79 307 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
U2AF1-209ENST00000475639 DYRK3O43781 588 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 TM7SF2O76062 418 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 P4HBP07237 508 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 CHRM3P20309 590 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 RRM1P23921 792 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 ATAD3BQ5T9A4 648 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 DENND1BQ6P3S1 775 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 TMPRSS6Q8IU80 811 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF614Q8N883 585 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 VMP1Q96GC9 406 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 TSEN34Q9BSV6 310 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 GRIP2Q9C0E4 1043 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 NMUR2Q9GZQ4 415 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 PAK5Q9P286 719 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 NEU2Q9Y3R4 380 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 IL6P05231 212 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 PEX2P28328 305 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 MAPKAPK2P49137 400 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 CCR3P51677 355 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 TAF2Q6P1X5 1199 aa11.79□□□□□ -0.52
U2AF1-209ENST00000475639 DDX53Q86TM3 631 aaKnown RBP11.79□□□□□ -0.52
U2AF1-209ENST00000475639 DQX1Q8TE96 717 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms