RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 A0A087WV48 116 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 HLA-FP30511 346 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 ABCG1P45844 678 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 TKTL1P51854 596 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 RPS14P62263 151 aaKnown RBP21.36■■□□□ 1.01
VPS36-203ENST00000475375 PTPRNQ16849 979 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 INTS8Q75QN2 995 aaKnown RBP21.36■■□□□ 1.01
VPS36-203ENST00000475375 FAM217AQ8IXS0 508 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 RNF139Q8WU17 664 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 TMA16Q96EY4 203 aaKnown RBP21.36■■□□□ 1.01
VPS36-203ENST00000475375 PAGE5Q96GU1 130 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 FBRSQ9HAH7 460 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 PRSS16Q9NQE7 514 aa21.36■■□□□ 1.01
VPS36-203ENST00000475375 FAM47DPA6NHR8 397 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 ZIC2O95409 532 aaPredicted RBP21.35■■□□□ 1.01
VPS36-203ENST00000475375 ZBED1O96006 694 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 NR2F2P24468 414 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 ZBTB16Q05516 673 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 KCNT1Q5JUK3 1230 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 FAM186BQ8IYM0 893 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 AHI1Q8N157 1196 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 PIP4K2CQ8TBX8 421 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 NDRG1Q92597 394 aaKnown RBP21.35■■□□□ 1.01
VPS36-203ENST00000475375 ACE2Q9BYF1 805 aaPredicted RBP21.35■■□□□ 1.01
VPS36-203ENST00000475375 ULBP1Q9BZM6 244 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 UBXN6Q9BZV1 441 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 SGK2Q9HBY8 427 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 OLA1Q9NTK5 396 aaKnown RBP21.35■■□□□ 1.01
VPS36-203ENST00000475375 GGA2Q9UJY4 613 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 NCKAP1Q9Y2A7 1128 aa21.35■■□□□ 1.01
VPS36-203ENST00000475375 K7ELQ4 463 aaPredicted RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 PLK4O00444 970 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 MAPK13O15264 365 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 ACTN4O43707 911 aaKnown RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 ATP5BP06576 529 aaKnown RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 PABPC1P11940 636 aaKnown RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 CTSKP43235 329 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 ZNF445P59923 1031 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 TRIP4Q15650 581 aaPredicted RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 RAB41Q5JT25 222 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 MBLAC2Q68D91 279 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 ZNF776Q68DI1 518 aaPredicted RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 GOLGA1Q92805 767 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 TMEM176AQ96HP8 235 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 CISHQ9NSE2 258 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 TRAF3IP3Q9Y228 551 aa21.34■■□□□ 1.01
VPS36-203ENST00000475375 SETXQ7Z333 2677 aaKnown RBP21.34■■□□□ 1.01
VPS36-203ENST00000475375 TMEM131Q92545 1883 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 DFNA5O60443 496 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 DLDP09622 509 aaKnown RBP21.33■■□□□ 1.01
VPS36-203ENST00000475375 POLR2EP19388 210 aaKnown RBP21.33■■□□□ 1.01
VPS36-203ENST00000475375 ADIPOR2Q86V24 386 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 TMPRSS12Q86WS5 348 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 TTC39CQ8N584 583 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 ANKRD52Q8NB46 1076 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 SLC4A11Q8NBS3 891 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 EDEM1Q92611 657 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 IPO9Q96P70 1041 aaKnown RBP21.33■■□□□ 1.01
VPS36-203ENST00000475375 LRRC4Q9HBW1 653 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 TMEM8AQ9HCN3 771 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 SUN2Q9UH99 717 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 SFMBT1Q9UHJ3 866 aa21.33■■□□□ 1.01
VPS36-203ENST00000475375 HBS1LQ9Y450 684 aaKnown RBP21.33■■□□□ 1.01
VPS36-203ENST00000475375 E9PAM4 449 aa21.32■■□□□ 1
VPS36-203ENST00000475375 JUPP14923 745 aa21.32■■□□□ 1
VPS36-203ENST00000475375 HNF1BP35680 557 aa21.32■■□□□ 1
VPS36-203ENST00000475375 RAD23BP54727 409 aa21.32■■□□□ 1
VPS36-203ENST00000475375 PDE4CQ08493 712 aa21.32■■□□□ 1
VPS36-203ENST00000475375 GOLGA7BQ2TAP0 167 aa21.32■■□□□ 1
VPS36-203ENST00000475375 PRAMEF14Q5SWL7 426 aa21.32■■□□□ 1
VPS36-203ENST00000475375 ADGRF1Q5T601 910 aa21.32■■□□□ 1
VPS36-203ENST00000475375 KIAA0895LQ68EN5 471 aa21.32■■□□□ 1
VPS36-203ENST00000475375 GATAD2AQ86YP4 633 aa21.32■■□□□ 1
VPS36-203ENST00000475375 SKA1Q96BD8 255 aa21.32■■□□□ 1
VPS36-203ENST00000475375 NXPE2Q96DL1 559 aa21.32■■□□□ 1
VPS36-203ENST00000475375 UBL7Q96S82 380 aaPredicted RBP21.32■■□□□ 1
VPS36-203ENST00000475375 MSI1O43347 362 aaKnown RBP21.31■■□□□ 1
VPS36-203ENST00000475375 ABCB4P21439 1286 aa21.31■■□□□ 1
VPS36-203ENST00000475375 PSMC2P35998 433 aaKnown RBP21.31■■□□□ 1
VPS36-203ENST00000475375 CLDN6P56747 220 aa21.31■■□□□ 1
VPS36-203ENST00000475375 RACK1P63244 317 aaKnown RBP21.31■■□□□ 1
VPS36-203ENST00000475375 ADIGQ0VDE8 80 aa21.31■■□□□ 1
VPS36-203ENST00000475375 C6orf118Q5T5N4 469 aa21.31■■□□□ 1
VPS36-203ENST00000475375 ARHGAP17Q68EM7 881 aa21.31■■□□□ 1
VPS36-203ENST00000475375 KRT39Q6A163 491 aa21.31■■□□□ 1
VPS36-203ENST00000475375 PM20D1Q6GTS8 502 aa21.31■■□□□ 1
VPS36-203ENST00000475375 ZC3H3Q8IXZ2 948 aaKnown RBP21.31■■□□□ 1
VPS36-203ENST00000475375 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.31■■□□□ 1
VPS36-203ENST00000475375 SEMA4DQ92854 862 aa21.31■■□□□ 1
VPS36-203ENST00000475375 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
VPS36-203ENST00000475375 SLC6A18Q96N87 628 aa21.31■■□□□ 1
VPS36-203ENST00000475375 MTG2Q9H4K7 406 aa21.31■■□□□ 1
VPS36-203ENST00000475375 AASDHPPTQ9NRN7 309 aa21.31■■□□□ 1
VPS36-203ENST00000475375 HESX1Q9UBX0 185 aa21.31■■□□□ 1
VPS36-203ENST00000475375 MAPK8IP1Q9UQF2 711 aa21.31■■□□□ 1
VPS36-203ENST00000475375 HELZ2Q9BYK8 2649 aaKnown RBP21.3■■□□□ 1
VPS36-203ENST00000475375 A0A1B0GTQ1 180 aa21.3■■□□□ 1
VPS36-203ENST00000475375 TULP2O00295 520 aa21.3■■□□□ 1
VPS36-203ENST00000475375 ENC1O14682 589 aa21.3■■□□□ 1
VPS36-203ENST00000475375 VILLO15195 856 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms