RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ZIM3Q96PE6 472 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 NELL2Q99435 816 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 MIPEPQ99797 713 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 NUSAP1Q9BXS6 441 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 MMRN2Q9H8L6 949 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 NTN4Q9HB63 628 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 ATP13A1Q9HD20 1204 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 EMC7Q9NPA0 242 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM105AQ9NUU6 356 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 INTS9Q9NV88 658 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 THG1LQ9NWX6 298 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 TRPM5Q9NZQ8 1165 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 MALT1Q9UDY8 824 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 AMACRQ9UHK6 382 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 NUP50Q9UKX7 468 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 MTMR6Q9Y217 621 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 AP3M1Q9Y2T2 418 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 WDR19Q8NEZ3 1342 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 PTCH1Q13635 1447 aa6.19□□□□□ -1.42
ECHDC1-215ENST00000475319 CASZ1Q86V15 1759 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SETBP1Q9Y6X0 1596 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 MST1RQ04912 1400 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ANO9A1A5B4 782 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PTPDC1A2A3K4 754 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TYW5A2RUC4 315 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SH3D21A4FU49 640 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 MEGF11A6BM72 1044 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM172BPA6NC97 362 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PRRT4C9JH25 899 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 K7ESF4 209 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 FZD9O00144 591 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TRAF5O00463 557 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 MAPK13O15264 365 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 RAD51BO15315 384 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 AQP9O43315 295 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SCO2O43819 266 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 RSL1D1O76021 490 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ASS1P00966 412 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SRGNP10124 158 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ETS2P15036 469 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CPA1P15085 419 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 GSTM2P28161 218 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CLK3P49761 638 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 GDI2P50395 445 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 NUP107P57740 925 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 C21orf58P58505 322 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 COG7P83436 770 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PURAQ00577 322 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TFAP4Q01664 338 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 RAD51Q06609 339 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 OASLQ15646 514 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ALX1Q15699 326 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC6Q16204 474 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC58Q4VC31 144 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF569Q5MCW4 686 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM180BQ6P0A1 224 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 C16orf54Q6UWD8 224 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 OLFM4Q6UX06 510 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TOGARAM2Q6ZUX3 1019 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF572Q7Z3I7 529 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ADCK1Q86TW2 530 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PPIL6Q8IXY8 311 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SYTL1Q8IYJ3 562 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ELMOD2Q8IZ81 293 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 IQCKQ8N0W5 287 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 FBXL16Q8N461 479 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 EIF1ADQ8N9N8 165 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PCYOX1LQ8NBM8 494 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SMG8Q8ND04 991 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SUPT20HQ8NEM7 779 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 OTUD7AQ8TE49 926 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 FNIP1Q8TF40 1166 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CHPT1Q8WUD6 406 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 NELFBQ8WX92 580 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 INPP5DQ92835 1189 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PBKQ96KB5 322 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 MED15Q96RN5 788 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 NUDCD1Q96RS6 583 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF184Q99676 751 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 C9orf16Q9BUW7 83 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 DSCC1Q9BVC3 393 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PHF20Q9BVI0 1012 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ASPNQ9BXN1 380 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ANKRD2Q9GZV1 360 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 GSX1Q9H4S2 264 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC134Q9H6E4 229 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ATP13A3Q9H7F0 1226 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 TMBIM4Q9HC24 238 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 SYTL2Q9HCH5 934 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 GPRC5BQ9NZH0 403 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 EHD3Q9NZN3 535 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms