RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PRSS36Q5K4E3 855 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ADGRF1Q5T601 910 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 KAZNQ674X7 775 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 SYCE2Q6PIF2 218 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 HTR3DQ70Z44 454 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 MTSS1LQ765P7 747 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 OTOP3Q7RTS5 596 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 LZTR1Q8N653 840 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF557Q8N988 423 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ING5Q8WYH8 240 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 P3H4Q92791 437 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 SMARCD2Q92925 531 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 OTUB2Q96DC9 234 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 TBC1D31Q96DN5 1066 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 TCEAL4Q96EI5 215 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 L2HGDHQ9H9P8 463 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 ZFP14Q9HCL3 533 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 CDH7Q9ULB5 785 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 TTC7AQ9ULT0 858 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 PI4K2BG5E9Z4 385 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 CCDC188H7C350 402 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 LEFTY2O00292 366 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 SOX1O00570 391 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 NCAM2O15394 837 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 TADA3O75528 432 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 GLP2RO95838 553 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 IGLV3-27P01718 113 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 CEBPBP17676 345 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 TACR2P21452 398 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 NR2C2P49116 596 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 KCNQ1P51787 676 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ATXN1P54253 815 aaKnown RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 OXCT1P55809 520 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 NRG1Q02297 640 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 NR1H3Q13133 447 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF211Q13398 564 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 EIF4EBP2Q13542 120 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ADGRE1Q14246 886 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 CBX2Q14781 532 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 CCDC85BQ15834 202 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ATP13A4Q4VNC1 1196 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ANKRD20A8PQ5CZ79 823 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 TMCO3Q6UWJ1 677 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 SLC13A5Q86YT5 568 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 RASGEF1CQ8N431 466 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 SH3RF2Q8TEC5 729 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 PPM1EQ8WY54 764 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 MYLIPQ8WY64 445 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 RAPGEF5Q92565 580 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ALG3Q92685 438 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 FGF13Q92913 245 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 HLA-CQ95604 372 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 RPRD1AQ96P16 312 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 RNF157Q96PX1 679 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ZYG11BQ9C0D3 744 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 PCDH18Q9HCL0 1135 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 GKN1Q9NS71 199 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 KLHL11Q9NVR0 708 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 GPATCH2LQ9NWQ4 482 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 OBP2AQ9NY56 170 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 CLEC1BQ9P126 229 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
COL12A1-206ENST00000474564 NR2E1Q9Y466 385 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 RAD54BQ9Y620 910 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 PLXNA3P51805 1871 aa10.69□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 EFCAB8A8MWE9 144 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 E9PAM4 449 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 CST8O60676 142 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 TCF4P15884 667 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 TCF3P15923 654 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 TGM2P21980 687 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 ACTN2P35609 894 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 ETFBP38117 255 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 CCR2P41597 374 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 CDKN2BP42772 138 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 IFNAR2P48551 515 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 MARCKSL1P49006 195 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF177Q13360 481 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 AUHQ13825 339 aaKnown RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 SLC5A9Q2M3M2 681 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 MPPE1Q53F39 396 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 MS4A13Q5J8X5 152 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 OTUD1Q5VV17 481 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 RAP1GAP2Q684P5 730 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 MFSD7Q6UXD7 560 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 RFX8Q6ZV50 586 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 LGI2Q8N0V4 545 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 HJURPQ8NCD3 748 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 CCDC26Q8TAB7 109 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms