RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 STARD13Q9Y3M8 1113 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 PRRT4C9JH25 899 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SGK1O00141 431 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 CYP1A1P04798 512 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 TNFAIP3P21580 790 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 NTSR1P30989 418 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 HOXC13P31276 330 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SLC6A4P31645 630 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SCNN1AP37088 669 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SULT1E1P49888 294 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 ASIC2Q16515 512 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 FAM133BQ5BKY9 247 aaKnown RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 EGFLAMQ63HQ2 1017 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 ANO7Q6IWH7 933 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 CHSY1Q86X52 802 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 LGI2Q8N0V4 545 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 ZNF557Q8N988 423 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 C11orf70Q9BRQ4 267 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 CIPCQ9C0C6 399 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 NCDNQ9UBB6 729 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 PAXBP1Q9Y5B6 917 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 FANCMQ8IYD8 2048 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 CCDC163A0A0D9SF12 145 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 KCNU1A8MYU2 1149 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 F5H5T6 163 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 TIMM44O43615 452 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 F9P00740 461 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 IGLV3-25P01717 112 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 TPM3P06753 285 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 HOXB2P14652 356 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 MTA1Q13330 715 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 NFKBIBQ15653 356 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 GEN1Q17RS7 908 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 MPP7Q5T2T1 576 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 SFMBT2Q5VUG0 894 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 RAP1GAP2Q684P5 730 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 NADSYN1Q6IA69 706 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 PHLDB2Q86SQ0 1253 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 NUP58Q9BVL2 599 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
VAMP4-203ENST00000474047 ADAM22Q9P0K1 906 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 CLEC4EQ9ULY5 219 aa14.74□□□□□ -0.05
VAMP4-203ENST00000474047 SMG5Q9UPR3 1016 aaKnown RBP14.74□□□□□ -0.05
VAMP4-203ENST00000474047 MYO18AQ92614 2054 aaKnown RBP14.73□□□□□ -0.05
VAMP4-203ENST00000474047 LRRC53A6NM62 1247 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 HRO43593 1189 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 RPP40O75818 363 aaKnown RBP14.73□□□□□ -0.05
VAMP4-203ENST00000474047 TACR2P21452 398 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 MMP8P22894 467 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 DEUP1Q05D60 604 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 SRSF5Q13243 272 aaKnown RBP14.73□□□□□ -0.05
VAMP4-203ENST00000474047 LPAL2Q16609 132 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 CLEC16AQ2KHT3 1053 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 MS4A13Q5J8X5 152 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 TMEM92Q6UXU6 159 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 MFN1Q8IWA4 741 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 CARNMT1Q8N4J0 409 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 P2RY11Q96G91 374 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 PCDHB18PQ96TA0 734 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 EPC1Q9H2F5 836 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 METTL5Q9NRN9 209 aaKnown RBP14.73□□□□□ -0.05
VAMP4-203ENST00000474047 ABCB8Q9NUT2 735 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 TMEM51Q9NW97 253 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 ELOVL2Q9NXB9 296 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 EBF1Q9UH73 591 aa14.73□□□□□ -0.05
VAMP4-203ENST00000474047 XPO7Q9UIA9 1087 aaKnown RBP14.73□□□□□ -0.05
VAMP4-203ENST00000474047 TCRBV21S2A2A0A5A6 115 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 H0Y626 953 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 NPC1O15118 1278 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ADAM23O75077 832 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 CALB1P05937 261 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 SGSHP51688 502 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 RPS24P62847 133 aaKnown RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 CDH18Q13634 790 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 EIF4HQ15056 248 aaKnown RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 SLC25A52Q3SY17 297 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 USP39Q53GS9 565 aaKnown RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 RABGAP1LQ5R372 815 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 CFAP52Q8N1V2 620 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 SUMF1Q8NBK3 374 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 WFIKKN2Q8TEU8 576 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 HMGB4Q8WW32 186 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 GAB3Q8WWW8 586 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ACOX2Q99424 681 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 NPY6RQ99463 290 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 SELENOOQ9BVL4 669 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 TPSD1Q9BZJ3 242 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 EDEM3Q9BZQ6 932 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 CACNA2D2Q9NY47 1150 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 GGA2Q9UJY4 613 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 GMEB2Q9UKD1 530 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 PLA2G4CQ9UP65 541 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 PABPC1P11940 636 aaKnown RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 UNGP13051 313 aaPredicted RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 POLR2EP19388 210 aaKnown RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 STARD3Q14849 445 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms