RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.8□□□□□ -1
CD47-204ENST00000471694 IFNEQ86WN2 208 aa8.8□□□□□ -1
CD47-204ENST00000471694 ACTR8Q9H981 624 aa8.8□□□□□ -1
CD47-204ENST00000471694 CDC42BPAQ5VT25 1732 aa8.8□□□□□ -1
CD47-204ENST00000471694 RABL6Q3YEC7 729 aaPredicted RBP8.79□□□□□ -1
CD47-204ENST00000471694 SDHAF4Q5VUM1 108 aa8.79□□□□□ -1
CD47-204ENST00000471694 C1orf146Q5VVC0 180 aa8.79□□□□□ -1
CD47-204ENST00000471694 WSCD1Q658N2 575 aa8.79□□□□□ -1
CD47-204ENST00000471694 C4orf19Q8IY42 314 aa8.79□□□□□ -1
CD47-204ENST00000471694 SLC2A14Q8TDB8 520 aa8.79□□□□□ -1
CD47-204ENST00000471694 IPCEF1Q8WWN9 437 aaPredicted RBP8.79□□□□□ -1
CD47-204ENST00000471694 CCT7Q99832 543 aa8.79□□□□□ -1
CD47-204ENST00000471694 ACTR5Q9H9F9 607 aaPredicted RBP8.79□□□□□ -1
CD47-204ENST00000471694 ITGA8P53708 1063 aa8.79□□□□□ -1
CD47-204ENST00000471694 P4HA3Q7Z4N8 544 aa8.79□□□□□ -1
CD47-204ENST00000471694 EFCAB3Q8N7B9 438 aa8.79□□□□□ -1
CD47-204ENST00000471694 TTC29Q8NA56 475 aaPredicted RBP8.79□□□□□ -1
CD47-204ENST00000471694 HCAR2Q8TDS4 363 aa8.79□□□□□ -1
CD47-204ENST00000471694 PANX3Q96QZ0 392 aa8.79□□□□□ -1
CD47-204ENST00000471694 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 C7orf25Q9BPX7 421 aa8.79□□□□□ -1
CD47-204ENST00000471694 APOL2Q9BQE5 337 aa8.79□□□□□ -1
CD47-204ENST00000471694 FAM167BQ9BTA0 163 aa8.79□□□□□ -1
CD47-204ENST00000471694 BRINP2Q9C0B6 783 aa8.79□□□□□ -1
CD47-204ENST00000471694 EPB41L4AQ9HCS5 686 aaPredicted RBP8.79□□□□□ -1
CD47-204ENST00000471694 RRN3Q9NYV6 651 aa8.79□□□□□ -1
CD47-204ENST00000471694 GRM6O15303 877 aa8.79□□□□□ -1
CD47-204ENST00000471694 GMFGO60234 142 aa8.79□□□□□ -1
CD47-204ENST00000471694 SLC35G4P0C7Q5 338 aa8.79□□□□□ -1
CD47-204ENST00000471694 RPL21P46778 160 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 COPZ1P61923 177 aa8.79□□□□□ -1
CD47-204ENST00000471694 ITGADQ13349 1161 aa8.79□□□□□ -1
CD47-204ENST00000471694 CCDC142Q17RM4 750 aa8.79□□□□□ -1
CD47-204ENST00000471694 TMC5Q6UXY8 1006 aa8.79□□□□□ -1
CD47-204ENST00000471694 LRRC69Q6ZNQ3 347 aa8.79□□□□□ -1
CD47-204ENST00000471694 ICA1LQ8NDH6 482 aa8.79□□□□□ -1
CD47-204ENST00000471694 BCAS4Q8TDM0 211 aa8.79□□□□□ -1
CD47-204ENST00000471694 DPEP2Q9H4A9 486 aa8.79□□□□□ -1
CD47-204ENST00000471694 SLC32A1Q9H598 525 aa8.79□□□□□ -1
CD47-204ENST00000471694 PRKAG3Q9UGI9 489 aa8.79□□□□□ -1
CD47-204ENST00000471694 TMCC3Q9ULS5 477 aa8.79□□□□□ -1
CD47-204ENST00000471694 HBS1LQ9Y450 684 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 SLC37A4O43826 429 aa8.79□□□□□ -1
CD47-204ENST00000471694 PDX1P52945 283 aa8.79□□□□□ -1
CD47-204ENST00000471694 R3HCC1LQ7Z5L2 792 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 CLEC4FQ8N1N0 589 aa8.79□□□□□ -1
CD47-204ENST00000471694 LENG9Q96B70 501 aa8.79□□□□□ -1
CD47-204ENST00000471694 ADAM33Q9BZ11 813 aa8.79□□□□□ -1
CD47-204ENST00000471694 V9GYQ6 96 aa8.79□□□□□ -1
CD47-204ENST00000471694 SH3BGRLO75368 114 aa8.79□□□□□ -1
CD47-204ENST00000471694 MICAL2O94851 1124 aa8.79□□□□□ -1
CD47-204ENST00000471694 SMAD3P84022 425 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 FKBP1CQ5VVH2 108 aa8.79□□□□□ -1
CD47-204ENST00000471694 ECSITQ9BQ95 431 aa8.79□□□□□ -1
CD47-204ENST00000471694 MRPL1Q9BYD6 325 aaKnown RBP8.79□□□□□ -1
CD47-204ENST00000471694 POLR1BQ9H9Y6 1135 aa8.79□□□□□ -1
CD47-204ENST00000471694 ZNF304Q9HCX3 659 aa8.79□□□□□ -1
CD47-204ENST00000471694 HCN3Q9P1Z3 774 aa8.79□□□□□ -1
CD47-204ENST00000471694 CNTNAP5Q8WYK1 1306 aa8.79□□□□□ -1
CD47-204ENST00000471694 TBC1D4O60343 1298 aa8.78□□□□□ -1
CD47-204ENST00000471694 ELFN1P0C7U0 828 aa8.78□□□□□ -1
CD47-204ENST00000471694 CLUP10909 449 aa8.78□□□□□ -1
CD47-204ENST00000471694 NTSP30990 170 aa8.78□□□□□ -1
CD47-204ENST00000471694 IGFALSP35858 605 aa8.78□□□□□ -1
CD47-204ENST00000471694 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
CD47-204ENST00000471694 PDK2Q15119 407 aa8.78□□□□□ -1
CD47-204ENST00000471694 EDRF1Q3B7T1 1238 aa8.78□□□□□ -1
CD47-204ENST00000471694 Q4G0T1 1027 aa8.78□□□□□ -1
CD47-204ENST00000471694 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 CRTC3Q6UUV7 619 aa8.78□□□□□ -1
CD47-204ENST00000471694 SYDE1Q6ZW31 735 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 CHST9Q7L1S5 443 aa8.78□□□□□ -1
CD47-204ENST00000471694 SCLYQ96I15 445 aa8.78□□□□□ -1
CD47-204ENST00000471694 ZNF333Q96JL9 665 aa8.78□□□□□ -1
CD47-204ENST00000471694 TTLL2Q9BWV7 592 aa8.78□□□□□ -1
CD47-204ENST00000471694 FOXP3Q9BZS1 431 aa8.78□□□□□ -1
CD47-204ENST00000471694 TM6SF2Q9BZW4 377 aa8.78□□□□□ -1
CD47-204ENST00000471694 ADNPQ9H2P0 1102 aa8.78□□□□□ -1
CD47-204ENST00000471694 MED4Q9NPJ6 270 aa8.78□□□□□ -1
CD47-204ENST00000471694 AGPAT3Q9NRZ7 376 aa8.78□□□□□ -1
CD47-204ENST00000471694 GIT1Q9Y2X7 761 aa8.78□□□□□ -1
CD47-204ENST00000471694 E9PBE3 544 aa8.78□□□□□ -1
CD47-204ENST00000471694 GDI1P31150 447 aa8.78□□□□□ -1
CD47-204ENST00000471694 SULT2A1Q06520 285 aa8.78□□□□□ -1
CD47-204ENST00000471694 VAC14Q08AM6 782 aa8.78□□□□□ -1
CD47-204ENST00000471694 IYDQ6PHW0 289 aa8.78□□□□□ -1
CD47-204ENST00000471694 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 BTN2A1Q7KYR7 527 aa8.78□□□□□ -1
CD47-204ENST00000471694 MAP3K14Q99558 947 aa8.78□□□□□ -1
CD47-204ENST00000471694 THUMPD3Q9BV44 507 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.78□□□□□ -1
CD47-204ENST00000471694 SEPT3Q9UH03 358 aa8.78□□□□□ -1
CD47-204ENST00000471694 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
CD47-204ENST00000471694 DNPEPQ9ULA0 475 aa8.78□□□□□ -1
CD47-204ENST00000471694 IQGAP3Q86VI3 1631 aa8.78□□□□□ -1
CD47-204ENST00000471694 CYP2C18P33260 490 aa8.78□□□□□ -1
CD47-204ENST00000471694 ARFIP2P53365 341 aa8.78□□□□□ -1
CD47-204ENST00000471694 PKP1Q13835 747 aa8.78□□□□□ -1
CD47-204ENST00000471694 TIGD5Q53EQ6 642 aa8.78□□□□□ -1
CD47-204ENST00000471694 ZC3H14Q6PJT7 736 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms