RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MANEALQ5VSG8 457 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 NUGGCQ68CJ6 796 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 TANGO2Q6ICL3 276 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 AADACL2Q6P093 401 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 MFSD7Q6UXD7 560 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 DENND1CQ8IV53 801 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 ST13P5Q8NFI4 369 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-209ENST00000470247 HSPH1Q92598 858 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 RNF34Q969K3 372 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 BTN2A3PQ96KV6 586 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-209ENST00000470247 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 NEU3Q9UQ49 428 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 HS3ST4Q9Y661 456 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 DENND4AQ7Z401 1863 aa11.66□□□□□ -0.54
SREBF1-209ENST00000470247 SPTBN5Q9NRC6 3674 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 E2F8A0AVK6 867 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 LATS1O95835 1130 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 APOEP02649 317 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 TUBB4AP04350 444 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 PRLRP16471 622 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 DNA2P51530 1060 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 RWDD2BP57060 319 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 AUHQ13825 339 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 DPYSL3Q14195 570 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 SMAD2Q15796 467 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 ARL13BQ3SXY8 428 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 C5orf22Q49AR2 442 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 RCOR2Q8IZ40 523 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 CELF5Q8N6W0 485 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 ATP6V0D2Q8N8Y2 350 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 EXD1Q8NHP7 514 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 COG1Q8WTW3 980 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 RNF25Q96BH1 459 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 FAF2Q96CS3 445 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 RPP25Q9BUL9 199 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 SIK2Q9H0K1 926 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 LINC00597Q9H2U6 94 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 DHX35Q9H5Z1 703 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 OBP2AQ9NY56 170 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 DDX56Q9NY93 547 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 CWC15Q9P013 229 aaKnown RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 OR12D3Q9UGF7 316 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 SNX12Q9UMY4 172 aa11.65□□□□□ -0.54
SREBF1-209ENST00000470247 ZFP37Q9Y6Q3 630 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-209ENST00000470247 IGLV3-10A0A075B6K4 115 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CTAGE9A4FU28 777 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 HEPACAM2A8MVW5 462 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 ANHXE9PGG2 379 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 KIF2AO00139 706 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-209ENST00000470247 KCNK3O14649 394 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 LRIG2O94898 1065 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 ZRANB2O95218 330 aaKnown RBP eCLIP11.64□□□□□ -0.55
SREBF1-209ENST00000470247 KRT1P04264 644 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 TACR2P21452 398 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 HOXC13P31276 330 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CASQ1P31415 396 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CXCR5P32302 372 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 GBP2P32456 591 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CDKN2BP42772 138 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 HCAR3P49019 387 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 IRAK1P51617 712 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CDH6P55285 790 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 TFF2Q03403 129 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 MTA1Q13330 715 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF211Q13398 564 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-209ENST00000470247 PDK2Q15119 407 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 ADGRF1Q5T601 910 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 RAP1GAP2Q684P5 730 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 FBXL22Q6P050 247 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 VSIG1Q86XK7 387 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
SREBF1-209ENST00000470247 UBL4BQ8N7F7 174 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 KIAA1958Q8N8K9 716 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 FGF14Q92915 247 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 IGSF8Q969P0 613 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 OSBPL9Q96SU4 736 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 PSMB7Q99436 277 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 CARD9Q9H257 536 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 KIF9Q9HAQ2 790 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 SLC12A6Q9UHW9 1150 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms