RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ADAM17P78536 824 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CHRNEQ04844 493 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SELENBP1Q13228 472 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 AP3B2Q13367 1082 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CEP55Q53EZ4 464 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 PARP10Q53GL7 1025 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FASTKD1Q53R41 847 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TFDP3Q5H9I0 405 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 KAZNQ674X7 775 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FAM117BQ6P1L5 589 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TIFABQ6ZNK6 161 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 MON1BQ7L1V2 547 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 LSMEM2Q8N112 164 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TMCO5AQ8N6Q1 288 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 MFSD2AQ8NA29 543 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FAM47BQ8NA70 645 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ACMSDQ8TDX5 336 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FIZ1Q96SL8 496 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 EYA3Q99504 573 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SENP7Q9BQF6 1050 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SLC13A1Q9BZW2 595 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CNGB3Q9NQW8 809 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 IP6K2Q9UHH9 426 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TEX264Q9Y6I9 313 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 RGSL1A5PLK6 1076 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 RNF103O00237 685 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 AKAP10O43572 662 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NUAK1O60285 661 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 MYO1DO94832 1006 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NTRK1P04629 796 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 C7P10643 843 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FGF3P11487 239 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 PTPN1P18031 435 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 PRKCHP24723 683 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SNRPFP62306 86 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 IFITM2Q01629 132 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 OCA2Q04671 838 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TRAF2Q12933 501 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NRF1Q16656 503 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 WDR45BQ5MNZ6 344 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TMEM26Q6ZUK4 368 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 C1orf186Q6ZWK4 172 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 MAVSQ7Z434 540 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 DCP2Q8IU60 420 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 DNAJC10Q8IXB1 793 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 DSELQ8IZU8 1212 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ANKFN1Q8N957 763 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SNX31Q8N9S9 440 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ANGPTL6Q8NI99 470 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SUN5Q8TC36 379 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TFAP2CQ92754 450 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TMA16Q96EY4 203 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NT5C1BQ96P26 610 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 GPR101Q96P66 508 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TMEM121Q9BTD3 319 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 STRA6Q9BX79 667 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 HOXD1Q9GZZ0 328 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 PDZD7Q9H5P4 517 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TUFT1Q9NNX1 390 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 POU2F3Q9UKI9 436 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 COQ4Q9Y3A0 265 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ANGPTL3Q9Y5C1 460 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 C1orf232A0A0U1RR37 186 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 LOC105371267A0A1B0GV96 52 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 TRIM38O00635 465 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 CYB561D2O14569 222 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 ZNF195O14628 629 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 ACOT8O14734 319 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 DCXO43602 365 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 TIMM44O43615 452 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 GLRA3O75311 464 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 JRKO75564 520 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 KRT34O76011 436 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 TMEM63AO94886 807 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 CPNE6O95741 557 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 C1QAP02745 245 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 SNHG28P0DPA3 235 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 JUNBP17275 347 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 TGM1P22735 817 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 HPCAL1P37235 193 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 GCLMP48507 274 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 HARS2P49590 506 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 NME5P56597 212 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 GNA12Q03113 381 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 PPIL2Q13356 520 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 PMS2P3Q13401 168 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 ARHGEF6Q15052 776 aa9.25□□□□□ -0.93
SMARCE1-207ENST00000469334 NHSL2Q5HYW2 709 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms