RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 M0QYV0 167 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 SH3BP5O60239 455 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 GJB3O75712 270 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 LATS1O95835 1130 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 CALCAP01258 141 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 PAEPP09466 180 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 BRD2P25440 801 aaKnown RBP21.95■■□□□ 1.1
COL9A3-207ENST00000467819 ZNF445P59923 1031 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 PMF1Q6P1K2 205 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 KDF1Q8NAX2 398 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-207ENST00000467819 OR2T3Q8NH03 318 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 WFIKKN2Q8TEU8 576 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 NUP58Q9BVL2 599 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 GTPBP4Q9BZE4 634 aaKnown RBP21.95■■□□□ 1.1
COL9A3-207ENST00000467819 GGA2Q9UJY4 613 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 STOML2Q9UJZ1 356 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 RALYQ9UKM9 306 aaKnown RBP21.95■■□□□ 1.1
COL9A3-207ENST00000467819 NEUROG3Q9Y4Z2 214 aa21.95■■□□□ 1.1
COL9A3-207ENST00000467819 TP53BP1Q12888 1972 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 SPEGQ15772 3267 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 RNF225M0QZC1 329 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 GABBR2O75899 941 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 IGLV3-19P01714 112 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 CD44P16070 742 aaKnown RBP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 KLHL10Q6JEL2 608 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 MSANTD2Q6P1R3 559 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 RFWD3Q6PCD5 774 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 SCML4Q8N228 414 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 CLEC4CQ8WTT0 213 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 SLC35F5Q8WV83 523 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 DHTKD1Q96HY7 919 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 CEP63Q96MT8 703 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 ZSWIM1Q9BR11 485 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 EIF2B4Q9UI10 523 aaKnown RBP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL9A3-207ENST00000467819 PLA2G4CQ9UP65 541 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 NFE2L3Q9Y4A8 694 aa21.94■■□□□ 1.1
COL9A3-207ENST00000467819 GOLGA6L7A0A1B0GV03 622 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 METTL12A8MUP2 240 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 TBL1XO60907 577 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 PABPC1P11940 636 aaKnown RBP21.93■■□□□ 1.1
COL9A3-207ENST00000467819 RDXP35241 583 aaKnown RBP21.93■■□□□ 1.1
COL9A3-207ENST00000467819 SLC14A1Q13336 389 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 CAMK2GQ13555 558 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-207ENST00000467819 HNRNPDQ14103 355 aaKnown RBP21.93■■□□□ 1.1
COL9A3-207ENST00000467819 CNGA2Q16280 664 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 ADIPOR2Q86V24 386 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 NAXDQ8IW45 347 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 AHI1Q8N157 1196 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 CHCHD4Q8N4Q1 142 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 WFDC5Q8TCV5 224 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 IRGQQ8WZA9 623 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 SNX19Q92543 992 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 TIGD1Q96MW7 591 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 ZDHHC5Q9C0B5 715 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 LHX5Q9H2C1 402 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 MAN1B1Q9UKM7 699 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 PCDHB9Q9Y5E1 797 aa21.93■■□□□ 1.1
COL9A3-207ENST00000467819 NYNRINQ9P2P1 1898 aaKnown RBP21.92■■□□□ 1.1
COL9A3-207ENST00000467819 TMEM8BA6NDV4 472 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 H0Y626 953 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 BCAT2O15382 392 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-207ENST00000467819 TRIM16O95361 564 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 LTFP02788 710 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 MBLAC2Q68D91 279 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 RRAGAQ7L523 313 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 ARHGEF19Q8IW93 802 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL9A3-207ENST00000467819 ZCCHC14Q8WYQ9 949 aaKnown RBP21.92■■□□□ 1.1
COL9A3-207ENST00000467819 GOLGA1Q92805 767 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 MIS12Q9H081 205 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 TMEM245Q9H330 911 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 MSRB2Q9Y3D2 182 aa21.92■■□□□ 1.1
COL9A3-207ENST00000467819 PKD1L2Q7Z442 2459 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 CABIN1Q9Y6J0 2220 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 IGLV3-27P01718 113 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 SLC6A4P31645 630 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 CD70P32970 193 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 SLC11A2P49281 568 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 TBX4P57082 545 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 CETN1Q12798 172 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 STILQ15468 1287 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 TRIP6Q15654 476 aaKnown RBP21.91■■□□□ 1.1
COL9A3-207ENST00000467819 ZNF423Q2M1K9 1284 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 FAM133BQ5BKY9 247 aaKnown RBP21.91■■□□□ 1.1
COL9A3-207ENST00000467819 PIK3R6Q5UE93 754 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 NUGGCQ68CJ6 796 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 KIAA0907Q7Z7F0 614 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-207ENST00000467819 UNC45BQ8IWX7 931 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 IL21RQ9HBE5 538 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 STIM2Q9P246 746 aa21.91■■□□□ 1.1
COL9A3-207ENST00000467819 PMM2O15305 246 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 ACSL4O60488 711 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 ACSL1P33121 698 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 PTPRNQ16849 979 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 TTI2Q6NXR4 508 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 LMO3Q8TAP4 145 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 NELFBQ8WX92 580 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 HSFY1Q96LI6 401 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 C6orf106Q9H6K1 298 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms