RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 STK33Q9BYT3 514 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 SPRTNQ9H040 489 aaPredicted RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 TM7SF3Q9NS93 570 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 ASNSD1Q9NWL6 643 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 MTMR4Q9NYA4 1195 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 ELOVL5Q9NYP7 299 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 FNIP2Q9P278 1114 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 FBXO2Q9UK22 296 aaPredicted RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 SETD1BQ9UPS6 1966 aaKnown RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 GXYLT2A0PJZ3 443 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 TTC34A8MYJ7 566 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 PRYO14603 147 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 RRHO14718 337 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 CTIFO43310 598 aaKnown RBP4.29□□□□□ -1.72
VPS50-209ENST00000467326 DHHO43323 396 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 GLP2RO95838 553 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 PLAUP00749 431 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FGBP02675 491 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ALADP13716 330 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ABCB4P21439 1286 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 SLC8A1P32418 973 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 CBFBQ13951 182 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 CSHL1Q14406 222 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ELF2Q15723 593 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 RAB30Q15771 203 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FAM110CQ1W6H9 321 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 DGKKQ5KSL6 1271 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 C10orf25Q5T742 122 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 XRRA1Q6P2D8 792 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ZNF793Q6ZN11 406 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 TFAP2DQ7Z6R9 452 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FAM186BQ8IYM0 893 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 SNRNP27Q8WVK2 155 aaKnown RBP4.29□□□□□ -1.72
VPS50-209ENST00000467326 GJA10Q969M2 543 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 COQ8BQ96D53 544 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 C18orf8Q96DM3 657 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 SCLT1Q96NL6 688 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FCRL4Q96PJ5 515 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 HERPUD2Q9BSE4 406 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 TM2D2Q9BX73 214 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FSCN3Q9NQT6 498 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 HELLSQ9NRZ9 838 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 FBXO28Q9NVF7 368 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 SLC39A10Q9ULF5 831 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 UBE2J1Q9Y385 318 aaPredicted RBP4.29□□□□□ -1.72
VPS50-209ENST00000467326 DAAM1Q9Y4D1 1078 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
VPS50-209ENST00000467326 NPC1O15118 1278 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 ITGA5P08648 1049 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 VDRP11473 427 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 CYP19A1P11511 503 aaPredicted RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 RPS6KB1P23443 525 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 HOXD9P28356 352 aaPredicted RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 BTKQ06187 659 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 GAB1Q13480 694 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 MSANTD2Q6P1R3 559 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 DEF8Q6ZN54 512 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 MRPL10Q7Z7H8 261 aaKnown RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 C16orf52Q8NHV5 167 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 GLMPQ8WWB7 406 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 PIGKQ92643 395 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 MUL1Q969V5 352 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 ELAC2Q9BQ52 826 aaKnown RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 RSPH9Q9H1X1 276 aaPredicted RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 NLRC4Q9NPP4 1024 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 RABGAP1Q9Y3P9 1069 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 AFG3L2Q9Y4W6 797 aa4.28□□□□□ -1.72
VPS50-209ENST00000467326 HEMK1Q9Y5R4 338 aaPredicted RBP4.28□□□□□ -1.72
VPS50-209ENST00000467326 ZMYM2Q9UBW7 1377 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 PNMA6EA0A0J9YXQ4 647 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 SLC22A23A1A5C7 686 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 C2CD4BA6NLJ0 364 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 C16orf96A6NNT2 1141 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 M0QZQ0 153 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 SOCS2O14508 198 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 IKBKBO14920 756 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 PLA2G6O60733 806 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 USP12O75317 370 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 BMP15O95972 392 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 CD63P08962 238 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 CTSAP10619 480 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 HOXA7P31268 230 aaPredicted RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 HOXD12P35452 270 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 IDUAP35475 653 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 DDIT3P35638 169 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 HTR3AP46098 478 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 MTA1Q13330 715 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 STARD3Q14849 445 aa4.27□□□□□ -1.73
VPS50-209ENST00000467326 RBMS2Q15434 407 aaKnown RBP4.27□□□□□ -1.73
VPS50-209ENST00000467326 SLC4A8Q2Y0W8 1093 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms