RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TIFAQ96CG3 184 aa3.46□□□□□ -1.86
GTF3C3-209ENST00000466862 WDR83Q9BRX9 315 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-209ENST00000466862 COLEC11Q9BWP8 271 aa3.46□□□□□ -1.86
GTF3C3-209ENST00000466862 ERVK-5Q9HDB9 667 aa3.46□□□□□ -1.86
GTF3C3-209ENST00000466862 TRIP12Q14669 1992 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 EVPLQ92817 2033 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SYF2O95926 243 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SLC5A1P13866 664 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 PECAM1P16284 738 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SLC8A1P32418 973 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 AGTR2P50052 363 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 PPATQ06203 517 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 BFSP2Q13515 415 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 DLGAP5Q15398 846 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 ELF2Q15723 593 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 C14orf80Q86SX3 495 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 ATP11CQ8NB49 1132 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 OR52N4Q8NGI2 321 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 LRRC46Q96FV0 321 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 PPP1R10Q96QC0 940 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 ELOVL1Q9BW60 279 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 ARHGAP39Q9C0H5 1083 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SPAG4Q9NPE6 437 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SELENONQ9NZV5 590 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 SNX13Q9Y5W8 968 aa3.45□□□□□ -1.86
GTF3C3-209ENST00000466862 EME2A4GXA9 379 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GOLGA6CA6NDK9 693 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GOLGA6BA6NDN3 693 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 POM121BA6NF01 834 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 RHPN2P1A8MT19 583 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 TTC34A8MYJ7 566 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PRSS44E7EML9 344 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 CCNT2O60583 730 aaKnown RBP3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PPP6R2O75170 966 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GOLGA6DP0CG33 693 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 CHRNB1P11230 501 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 AKR1A1P14550 325 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 MMP8P22894 467 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 TNFRSF8P28908 595 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 SEMA3BQ13214 749 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PTGR1Q14914 329 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 MSANTD2Q6P1R3 559 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 B4GALNT4Q76KP1 1039 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 RBM23Q86U06 439 aaKnown RBP3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 ADGRF4Q8IZF3 695 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PAQR4Q8N4S7 273 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 TMEM199Q8N511 208 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 NPIPB3Q92617 1050 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 CLMNQ96JQ2 1002 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GPR78Q96P69 363 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PAAF1Q9BRP4 392 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 NUDT22Q9BRQ3 303 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 ZPBPQ9BS86 351 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 TMEM204Q9BSN7 226 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 MAGEB5Q9BZ81 275 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 MYLK2Q9H1R3 596 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 SLCO5A1Q9H2Y9 848 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 IL21RQ9HBE5 538 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 FSCN3Q9NQT6 498 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GJB4Q9NTQ9 266 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 GOLGA6AQ9NYA3 693 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 TMOD4Q9NZQ9 345 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 PCDHA7Q9UN72 937 aa3.44□□□□□ -1.86
GTF3C3-209ENST00000466862 CLEC18AA5D8T8 446 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 TNFRSF13BO14836 293 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 KPNA5O15131 536 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 MDM4O15151 490 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 PRPF4O43172 522 aaKnown RBP eCLIP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 KRT86O43790 486 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 KAT7O95251 611 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 ENO1P06733 434 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 SLC3A2P08195 630 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 KRT81Q14533 505 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 C6orf10Q5SRN2 563 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 LIPMQ5VYY2 423 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 ZNF324BQ6AW86 544 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 ISM2Q6H9L7 571 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 PPP4R4Q6NUP7 873 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 DHRS13Q6UX07 377 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 TRAPPC11Q7Z392 1133 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 CLEC18CQ8NCF0 446 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 KAT2BQ92831 832 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 INPP5DQ92835 1189 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 FAM84BQ96KN1 310 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 ZNF347Q96SE7 839 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 PCDHAC1Q9H158 963 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 MAP6D1Q9H9H5 199 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 FZD3Q9NPG1 666 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 TCEAL9Q9UHQ7 104 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 UTS2RQ9UKP6 389 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 ZMYND8Q9ULU4 1186 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 G3BP2Q9UN86 482 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 B3GNT3Q9Y2A9 372 aa3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 TCF20Q9UGU0 1960 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-209ENST00000466862 H0YGN5 161 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 PCDH17O14917 1159 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 COQ9O75208 318 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 CNTN5O94779 1100 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms