RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SLC41A1Q8IVJ1 513 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 MFN1Q8IWA4 741 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 TRIM59Q8IWR1 403 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 FAM217AQ8IXS0 508 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 MINDY1Q8N5J2 469 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 HJURPQ8NCD3 748 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-206ENST00000466591 FAM81BQ96LP2 452 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 NUP58Q9BVL2 599 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 MKRN2Q9H000 416 aaKnown RBP18.23■□□□□ 0.51
COL7A1-206ENST00000466591 CD93Q9NPY3 652 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 CLEC4EQ9ULY5 219 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 PCDHB9Q9Y5E1 797 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 IRAK2O43187 625 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 ACSL4O60488 711 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 PABPC1P11940 636 aaKnown RBP18.22■□□□□ 0.51
COL7A1-206ENST00000466591 HLA-EP13747 358 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 MAOBP27338 520 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 GNA15P30679 374 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 TPMTP51580 245 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 PKDCCQ504Y2 493 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 PEAR1Q5VY43 1037 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-206ENST00000466591 MSANTD2Q6P1R3 559 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 RFWD3Q6PCD5 774 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 ENOSF1Q7L5Y1 443 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 SCUBE3Q8IX30 993 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 CARNMT1Q8N4J0 409 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 GANCQ8TET4 914 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 CLEC4CQ8WTT0 213 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 LHX5Q9H2C1 402 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 ITM2CQ9NQX7 267 aa18.22■□□□□ 0.51
COL7A1-206ENST00000466591 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 DNTTP04053 509 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 HLA-FP30511 346 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 MTIF2P46199 727 aaKnown RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 ARHGAP44Q17R89 818 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 TTC31Q49AM3 519 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 RNF219Q5W0B1 726 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 MBLAC2Q68D91 279 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 ZCCHC9Q8N567 271 aaKnown RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 OR2T3Q8NH03 318 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 ZNF419Q96HQ0 510 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-206ENST00000466591 TJP2Q9UDY2 1190 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 SLC12A6Q9UHW9 1150 aa18.21■□□□□ 0.51
COL7A1-206ENST00000466591 A0A1B0GTW7 788 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 GOLGA6L7A0A1B0GV03 622 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 MOCS3O95396 460 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 BMP6P22004 513 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 UBE2HP62256 183 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 SIM1P81133 766 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-206ENST00000466591 SHC2P98077 582 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 RING1Q06587 406 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 DCAF12L1Q5VU92 463 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 LRSAM1Q6UWE0 723 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 ZNF366Q8N895 744 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 CADM4Q8NFZ8 388 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 ADAM32Q8TC27 787 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 RNF34Q969K3 372 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 P2RY11Q96G91 374 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 NOX5Q96PH1 765 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 MED15Q96RN5 788 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 CRACR2AQ9BSW2 395 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 IRX2Q9BZI1 471 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-206ENST00000466591 SYNCQ9H7C4 482 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 FBRSQ9HAH7 460 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 CAPN10Q9HC96 672 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 CD248Q9HCU0 757 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 WSB2Q9NYS7 404 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-206ENST00000466591 USP36Q9P275 1121 aaKnown RBP18.2■□□□□ 0.5
COL7A1-206ENST00000466591 SUN2Q9UH99 717 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 RWDD2AQ9UIY3 292 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 STOML2Q9UJZ1 356 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 TLR6Q9Y2C9 796 aa18.2■□□□□ 0.5
COL7A1-206ENST00000466591 CEP192Q8TEP8 1941 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 H0Y626 953 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 RNASEH1O60930 286 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 DLDP09622 509 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 MARSP56192 900 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 SFSWAPQ12872 951 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 MPP7Q5T2T1 576 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 PIK3R6Q5UE93 754 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 DENND1BQ6P3S1 775 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 DQX1Q8TE96 717 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 KREMEN1Q96MU8 473 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 ZDHHC5Q9C0B5 715 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 PDCL3Q9H2J4 239 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 FAM204AQ9H8W3 233 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 KIAA1468Q9P260 1216 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 NAALADL1Q9UQQ1 740 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 NCKAP1Q9Y2A7 1128 aa18.19■□□□□ 0.5
COL7A1-206ENST00000466591 TNRC6BQ9UPQ9 1833 aaKnown RBP18.19■□□□□ 0.5
COL7A1-206ENST00000466591 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 CD70P32970 193 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 SGSHP51688 502 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 SNX16P57768 344 aa18.18■□□□□ 0.5
COL7A1-206ENST00000466591 ENPP2Q13822 863 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms