RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LMO3Q8TAP4 145 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 WFIKKN2Q8TEU8 576 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 NELFBQ8WX92 580 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 SCNM1Q9BWG6 230 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 ADAM33Q9BZ11 813 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 PPP1R3GB7ZBB8 358 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 P4HA2O15460 535 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 CALCAP01258 141 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 LTFP02788 710 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 SGSHP51688 502 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 SIM1P81133 766 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-206ENST00000466532 FNDC3BQ53EP0 1204 aaKnown RBP19.95■□□□□ 0.78
COL9A3-206ENST00000466532 ARHGEF19Q8IW93 802 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 CADM4Q8NFZ8 388 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 OR2T3Q8NH03 318 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 CLEC4CQ8WTT0 213 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 CYB5D2Q8WUJ1 264 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 DNASE2BQ8WZ79 361 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 GOLGA1Q92805 767 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 ABCB8Q9NUT2 735 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 DNAAF2Q9NVR5 837 aaKnown RBP19.95■□□□□ 0.78
COL9A3-206ENST00000466532 GGA2Q9UJY4 613 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 PLA2G4CQ9UP65 541 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 CTNND2Q9UQB3 1225 aa19.95■□□□□ 0.78
COL9A3-206ENST00000466532 AKAP13Q12802 2813 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 A0A1B0GTW7 788 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 BICDL2A1A5D9 508 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 IGLV3-19P01714 112 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 IGLV3-27P01718 113 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 PABPC1P11940 636 aaKnown RBP19.94■□□□□ 0.78
COL9A3-206ENST00000466532 CD59P13987 128 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 BMP6P22004 513 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 DCAF12L1Q5VU92 463 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 UNC45BQ8IWX7 931 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 AHI1Q8N157 1196 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 ZNF366Q8N895 744 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL9A3-206ENST00000466532 HSFY1Q96LI6 401 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 NUP58Q9BVL2 599 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 MIS12Q9H081 205 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 MIR1-1HGQ9H1L0 117 aa19.94■□□□□ 0.78
COL9A3-206ENST00000466532 GOLGA6L7A0A1B0GV03 622 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 BIN1O00499 593 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 TBL1XO60907 577 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 FBXO21O94952 628 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 SLC11A2P49281 568 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 TBX4P57082 545 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 GCNT1Q02742 428 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 KCNH2Q12809 1159 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 GRIK2Q13002 908 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 CAMK2GQ13555 558 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-206ENST00000466532 PIK3R6Q5UE93 754 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 NUGGCQ68CJ6 796 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 RFWD3Q6PCD5 774 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 FOXR2Q6PJQ5 311 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 ADIPOR2Q86V24 386 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 FAM124AQ86V42 546 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 ZCCHC9Q8N567 271 aaKnown RBP19.93■□□□□ 0.78
COL9A3-206ENST00000466532 EHBP1Q8NDI1 1231 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 TMEM245Q9H330 911 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 NFE2L3Q9Y4A8 694 aa19.93■□□□□ 0.78
COL9A3-206ENST00000466532 PLXNA2O75051 1894 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 METTL12A8MUP2 240 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 HYAL3O43820 417 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-206ENST00000466532 ACSL4O60488 711 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 GJB3O75712 270 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 GNA14O95837 355 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 SLC6A4P31645 630 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 STX17P56962 302 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 FAM193AP78312 1265 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 RING1Q06587 406 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 SLC14A1Q13336 389 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 MORC3Q14149 939 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 PTPRNQ16849 979 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 FAM133BQ5BKY9 247 aaKnown RBP19.92■□□□□ 0.78
COL9A3-206ENST00000466532 MPP7Q5T2T1 576 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 MBLAC2Q68D91 279 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 KIAA0907Q7Z7F0 614 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-206ENST00000466532 TRIM59Q8IWR1 403 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 WFDC5Q8TCV5 224 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 IRX2Q9BZI1 471 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-206ENST00000466532 ZDHHC5Q9C0B5 715 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 LHX5Q9H2C1 402 aa19.92■□□□□ 0.78
COL9A3-206ENST00000466532 IRAK2O43187 625 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 AFPP02771 609 aaKnown RBP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 ATP5BP06576 529 aaKnown RBP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 CD70P32970 193 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 HNRNPDQ14103 355 aaKnown RBP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 AZIN2Q96A70 460 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 KREMEN1Q96MU8 473 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 TMEM121BQ9BXQ6 578 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 ST7Q9NRC1 585 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 STIM2Q9P246 746 aa19.91■□□□□ 0.78
COL9A3-206ENST00000466532 EIF2B4Q9UI10 523 aaKnown RBP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL9A3-206ENST00000466532 PTPRBP23467 1997 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 BCAT2O15382 392 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 SH3BP5O60239 455 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 FYNP06241 537 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 DLDP09622 509 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms