RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 LRRC3Q9BY71 257 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 TRIM7Q9C029 511 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 LHX5Q9H2C1 402 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 KIF9Q9HAQ2 790 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 ZFP14Q9HCL3 533 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 TRPC7Q9HCX4 862 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 ZNF334Q9HCZ1 680 aaPredicted RBP10.4□□□□□ -0.74
PMF1-204ENST00000466489 CNGB3Q9NQW8 809 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 SEPT11Q9NVA2 429 aaKnown RBP10.4□□□□□ -0.74
PMF1-204ENST00000466489 AMACRQ9UHK6 382 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 SLC12A6Q9UHW9 1150 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
PMF1-204ENST00000466489 TFR2Q9UP52 801 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 SCML2Q9UQR0 700 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 ALG6Q9Y672 507 aa10.4□□□□□ -0.74
PMF1-204ENST00000466489 LOC730098B7Z3J9 87 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 RASGRF2O14827 1237 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 DAPK3O43293 454 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 SPOPO43791 374 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 SUN1O94901 812 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 ZBED1O96006 694 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 F11P03951 625 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 CYP1A2P05177 515 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 CCR2P41597 374 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 TUBP50607 506 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 USP46P62068 366 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 CYP4F8P98187 520 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 CDR2Q01850 454 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 ADIGQ0VDE8 80 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 RIPK1Q13546 671 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 SPDYAQ5MJ70 313 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 HECTD3Q5T447 861 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 C6orf89Q6UWU4 347 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 DDX42Q86XP3 938 aaKnown RBP eCLIP10.39□□□□□ -0.75
PMF1-204ENST00000466489 PASD1Q8IV76 773 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 YAF2Q8IY57 180 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 CCDC105Q8IYK2 499 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 ATL2Q8NHH9 583 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 ZSCAN18Q8TBC5 510 aaPredicted RBP10.39□□□□□ -0.75
PMF1-204ENST00000466489 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 SLC35F5Q8WV83 523 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 IRGQQ8WZA9 623 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 MYADMQ96S97 322 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 INTS9Q9NV88 658 aaKnown RBP10.39□□□□□ -0.75
PMF1-204ENST00000466489 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 IL37Q9NZH6 218 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 BCCIPQ9P287 314 aaKnown RBP eCLIP10.39□□□□□ -0.75
PMF1-204ENST00000466489 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
PMF1-204ENST00000466489 FAM92AA1XBS5 289 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 HHLA1C9JL84 531 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 MYO1FO00160 1098 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 ECI2O75521 394 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 DNAJC8O75937 253 aaPredicted RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 LCP1P13796 627 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 GJA1P17302 382 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 HDCP19113 662 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 WEE1P30291 646 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 ALDH3A1P30838 453 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 HNRNPH1P31943 449 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 GPD2P43304 727 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 MMP13P45452 471 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 RGS7P49802 495 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 COPS2P61201 443 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 MAGOHP61326 146 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 STAT4Q14765 748 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 RASA2Q15283 850 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 PPP1R7Q15435 360 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 SNCBQ16143 134 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 RAB41Q5JT25 222 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 BTBD8Q5XKL5 378 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 KCTD16Q68DU8 428 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 JAMLQ86YT9 394 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 ZDHHC17Q8IUH5 632 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 CMTM8Q8IZV2 173 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 SCML4Q8N228 414 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 CELF5Q8N6W0 485 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 RNF139Q8WU17 664 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 DEPDC1BQ8WUY9 529 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 ASB16Q96NS5 453 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 XPO6Q96QU8 1125 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 AP1M1Q9BXS5 423 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 TXLNGYQ9BZA5 131 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 ACP6Q9NPH0 428 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 OLA1Q9NTK5 396 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 THG1LQ9NWX6 298 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 OBP2AQ9NY56 170 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 CLIC5Q9NZA1 410 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms