RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TNFRSF8P28908 595 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 GBP1P32455 592 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 DNA2P51530 1060 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 RWDD2BP57060 319 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 DUSP4Q13115 394 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 CNGA2Q16280 664 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 ITPRIPL2Q3MIP1 535 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 SGO2Q562F6 1265 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 C9orf57Q5W0N0 161 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 CC2D1AQ6P1N0 951 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 MMS22LQ6ZRQ5 1243 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 ERICH1Q86X53 443 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 SLC4A11Q8NBS3 891 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 BPIFB1Q8TDL5 484 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 MAIP1Q8WWC4 291 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 CD101Q93033 1021 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 BBC3Q96PG8 261 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 TPSD1Q9BZJ3 242 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 GOLPH3Q9H4A6 298 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 EBF3Q9H4W6 596 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 GDAP2Q9NXN4 497 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 TUBGCP4Q9UGJ1 667 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 IP6K2Q9UHH9 426 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 NEUROG3Q9Y4Z2 214 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 PCDHA3Q9Y5H8 950 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 CEP192Q8TEP8 1941 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 KRIT1O00522 736 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 PIRO00625 290 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 DPYSL4O14531 572 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 PSTPIP1O43586 416 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 CAPNS1P04632 268 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 ARSAP15289 507 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 GABRR2P28476 465 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 LRPAP1P30533 357 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 TAF6P49848 677 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 IRX4P78413 519 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 MAMLD1Q13495 774 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 ZNF394Q53GI3 561 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 DNAJC24Q6P3W2 148 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 DPH6Q7L8W6 267 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 PASD1Q8IV76 773 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 EIF1ADQ8N9N8 165 aaKnown RBP14.43□□□□□ -0.1
HDAC6-215ENST00000465457 C3orf20Q8ND61 904 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 C1orf131Q8NDD1 294 aaKnown RBP14.43□□□□□ -0.1
HDAC6-215ENST00000465457 RPLP0P6Q8NHW5 317 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 IPO4Q8TEX9 1081 aaKnown RBP14.43□□□□□ -0.1
HDAC6-215ENST00000465457 WHAMMQ8TF30 809 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 RUNDC3BQ96NL0 473 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 LPIN3Q9BQK8 851 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 SDCBP2Q9H190 292 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 ATXN3LQ9H3M9 355 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC6-215ENST00000465457 STIM2Q9P246 746 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 CCL26Q9Y258 94 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 GPSM3Q9Y4H4 160 aa14.43□□□□□ -0.1
HDAC6-215ENST00000465457 TMEM110-MUSTN1A8MSY1 372 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 NDST1P52848 882 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 PMS2CLQ68D20 193 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 LCLAT1Q6UWP7 414 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 MAATS1Q7Z4T9 603 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 PROSER1Q86XN7 944 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 IFT20Q8IY31 132 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 ATAD1Q8NBU5 361 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 CCDC26Q8TAB7 109 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 TFAP2BQ92481 460 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 HEXIM2Q96MH2 286 aaKnown RBP14.42□□□□□ -0.1
HDAC6-215ENST00000465457 PNKPQ96T60 521 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 FAM83CQ9BQN1 747 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 ELOVL4Q9GZR5 314 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 IL21Q9HBE4 155 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 GKN1Q9NS71 199 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 MSRB2Q9Y3D2 182 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 SNX9Q9Y5X1 595 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 MAST4O15021 2626 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 PCDH15Q96QU1 1955 aa14.42□□□□□ -0.1
HDAC6-215ENST00000465457 PLXND1Q9Y4D7 1925 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 MTMR11A4FU01 709 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 O00370 1275 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 TRDMT1O14717 391 aaKnown RBP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 KHNYNO15037 678 aaKnown RBP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 ZRANB2O95218 330 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 CALCAP01258 141 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 FGGP02679 453 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 CETN2P41208 172 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 MAPK8P45983 427 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 PEX5P50542 639 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 GUCY2FP51841 1108 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 EPHB3P54753 998 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 CDH8P55286 799 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 VSNL1P62760 191 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 FAM193AP78312 1265 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 GRSF1Q12849 480 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 PIGHQ14442 188 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 ZNF268Q14587 947 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 LONRF2Q1L5Z9 754 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 COL28A1Q2UY09 1125 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 LRRC38Q5VT99 294 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms