RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FAM193BQ96PV7 902 aaPredicted RBP13.22□□□□□ -0.29
VAPB-203ENST00000463370 ACSS3Q9H6R3 686 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 PNPLA8Q9NP80 782 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 PIH1D1Q9NWS0 290 aaKnown RBP13.22□□□□□ -0.29
VAPB-203ENST00000463370 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 SFMBT1Q9UHJ3 866 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
VAPB-203ENST00000463370 KCNK1O00180 336 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 RNF103O00237 685 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 DNM1LO00429 736 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 SPAG7O75391 227 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 SOAT2O75908 522 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 LRIG2O94898 1065 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 IGLV3-25P01717 112 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 DRD4P21917 467 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 PAX3P23760 479 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 ATP5DP30049 168 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 GEMIN4P57678 1058 aaKnown RBP13.22□□□□□ -0.29
VAPB-203ENST00000463370 TPI1P60174 286 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 ARHGEF18Q6ZSZ5 1173 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 C4orf33Q8N1A6 199 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 CASP10Q92851 521 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 SPATA13Q96N96 652 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 MARCH5Q9NX47 278 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 OR12D3Q9UGF7 316 aa13.22□□□□□ -0.29
VAPB-203ENST00000463370 COL4A4P53420 1690 aaPredicted RBP13.22□□□□□ -0.29
VAPB-203ENST00000463370 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.21□□□□□ -0.29
VAPB-203ENST00000463370 C1QAP02745 245 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 USP46P62068 366 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 RSPO2Q6UXX9 243 aaPredicted RBP13.21□□□□□ -0.29
VAPB-203ENST00000463370 SCML4Q8N228 414 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 RIBC1Q8N443 379 aaPredicted RBP13.21□□□□□ -0.29
VAPB-203ENST00000463370 GDAP1Q8TB36 358 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 CHMP6Q96FZ7 201 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 DHRS4Q9BTZ2 278 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 PSMC3IPQ9P2W1 217 aaPredicted RBP13.21□□□□□ -0.29
VAPB-203ENST00000463370 NEU3Q9UQ49 428 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.29
VAPB-203ENST00000463370 A0A1W2PQH9 124 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 HACD1B0YJ81 288 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 PHBP35232 272 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 MAGEA3P43357 314 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 SLC11A1P49279 550 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 AIF1P55008 147 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 CCL23P55773 120 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 BFSP2Q13515 415 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 OLIG2Q13516 323 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 SEMA5AQ13591 1074 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 LRRC34Q8IZ02 419 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 ABI1Q8IZP0 508 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 ZNF567Q8N184 647 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 COLGALT1Q8NBJ5 622 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 DCAKDQ8WVC6 231 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 RNF34Q969K3 372 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 PAK6Q9NQU5 681 aaPredicted RBP13.21□□□□□ -0.3
VAPB-203ENST00000463370 RRN3Q9NYV6 651 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 SLC24A2Q9UI40 661 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 ADAM28Q9UKQ2 775 aa13.21□□□□□ -0.3
VAPB-203ENST00000463370 NLRC5Q86WI3 1866 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.3
VAPB-203ENST00000463370 LAMA3Q16787 3333 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 F9P00740 461 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 KRT15P19012 456 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 EPHB2P29323 1055 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 GLUD2P49448 558 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 PDK1Q15118 436 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ARL13BQ3SXY8 428 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ARTNQ5T4W7 220 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
VAPB-203ENST00000463370 SIK2Q9H0K1 926 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ARHGEF37A1IGU5 675 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 EBAG9O00559 213 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 IRAK2O43187 625 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 FAM155BO75949 473 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 SRGAP2BP0DMP2 458 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 PSMB4P28070 264 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ARPP19P56211 112 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 CTXN3Q4LDR2 81 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 PPP1R21Q6ZMI0 780 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 BZW1Q7L1Q6 419 aaKnown RBP13.2□□□□□ -0.3
VAPB-203ENST00000463370 TAS1R1Q7RTX1 841 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
VAPB-203ENST00000463370 MCUQ8NE86 351 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 CELF6Q96J87 481 aaKnown RBP13.2□□□□□ -0.3
VAPB-203ENST00000463370 SIGLEC10Q96LC7 697 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms