RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 P2RY11Q96G91 374 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 BATF3Q9NR55 127 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 TPP1O14773 563 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 STRNO43815 780 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 HUS1O60921 280 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 RARBP10826 455 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 ACAT1P24752 427 aaKnown RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 PSMB4P28070 264 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 PGM1P36871 562 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 SCNN1AP37088 669 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 TAF6P49848 677 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 KDSRQ06136 332 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 SOX4Q06945 474 aaPredicted RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 RCN1Q15293 331 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 ACSBG2Q5FVE4 666 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 RFX8Q6ZV50 586 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 TREML1Q86YW5 311 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 SH3TC2Q8TF17 1288 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 RNF139Q8WU17 664 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 DNAJB3Q8WWF6 145 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 MAML3Q96JK9 1138 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 XPNPEP3Q9NQH7 507 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
ACTB-207ENST00000462494 HBS1LQ9Y450 684 aaKnown RBP17.44■□□□□ 0.38
ACTB-207ENST00000462494 BIRC5O15392 142 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 KRT36O76013 467 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 CNTFP26441 200 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 RPL34P49207 117 aaKnown RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 NDUFV1P49821 464 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 RPL10AP62906 217 aaKnown RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 LRRC8BQ6P9F7 803 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 CES3Q6UWW8 571 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 GPR142Q7Z601 462 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■■□□□ 14.5
ACTB-207ENST00000462494 B3GALNT2Q8NCR0 500 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 WDR60Q8WVS4 1066 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 TMEM40Q8WWA1 233 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 PGBD4Q96DM1 585 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 TNIP3Q96KP6 325 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 LRRC42Q9Y546 428 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 RALGAPA2Q2PPJ7 1873 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 M0QYT0 321 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 XPO1O14980 1071 aaKnown RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 SNNO75324 88 aaPredicted RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 BEST1O76090 585 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 ALDOAP04075 364 aaKnown RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 N4BP2L1Q5TBK1 243 aaPredicted RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 STEAP4Q687X5 459 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 PACS1Q6VY07 963 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 TIFABQ6ZNK6 161 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
ACTB-207ENST00000462494 HACE1Q8IYU2 909 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 FBXO27Q8NI29 283 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 FERMT1Q9BQL6 677 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 DNAI2Q9GZS0 605 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 GDAP2Q9NXN4 497 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 PSAT1Q9Y617 370 aa17.43■□□□□ 0.38
ACTB-207ENST00000462494 CAPN14A8MX76 684 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 OPHN1O60890 802 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 LYPLA1O75608 230 aaPredicted RBP17.42■□□□□ 0.38
ACTB-207ENST00000462494 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 MLNP12872 115 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 KCNA4P22459 653 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 EPHX2P34913 555 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 PDE1BQ01064 536 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 NIPAL4Q0D2K0 466 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 OLIG2Q13516 323 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 PRAMEF19Q5SWL8 479 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 KYAT3Q6YP21 454 aaKnown RBP17.42■□□□□ 0.38
ACTB-207ENST00000462494 MARK2Q7KZI7 788 aaKnown RBP17.42■□□□□ 0.38
ACTB-207ENST00000462494 OSTM1Q86WC4 334 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 TP53INP2Q8IXH6 220 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 RAB3IL1Q8TBN0 382 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 DTX3LQ8TDB6 740 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 STMN2Q93045 179 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 ANKRD27Q96NW4 1050 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 PGLYRP2Q96PD5 576 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 EBF4Q9BQW3 602 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 THAP1Q9NVV9 213 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 SYBUQ9NX95 663 aa17.42■□□□□ 0.38
ACTB-207ENST00000462494 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.42■□□□□ 0.38
ACTB-207ENST00000462494 E2F8A0AVK6 867 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 HOXD8P13378 290 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 PGAM1P18669 254 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 PNPLA4P41247 253 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 RABGGTBP53611 331 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 IFRD2Q12894 506 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 PDE1CQ14123 709 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 MUM1Q2TAK8 710 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 SV2CQ496J9 727 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms