RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 CDK16Q00536 496 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 KLF1Q13351 362 aaPredicted RBP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SV2CQ496J9 727 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 KAZNQ674X7 775 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 TRNP1Q6NT89 227 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SPATA31D4Q6ZUB0 917 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC2A14Q8TDB8 520 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 TCP10LQ8TDR4 215 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 CLEC4CQ8WTT0 213 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 NCSTNQ92542 709 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SKA1Q96BD8 255 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 TTC1Q99614 292 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 ECSITQ9BQ95 431 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 TSSK1BQ9BXA7 367 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 BANF1O75531 89 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC1A1P43005 524 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 CDK7P50613 346 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SCNN1BP51168 640 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 CDO1Q16878 200 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 ANKMY2Q8IV38 441 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 ARHGAP24Q8N264 748 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 ARFGAP1Q8N6T3 406 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 NDRG1Q92597 394 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 PREBQ9HCU5 417 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 PCSK1NQ9UHG2 260 aa12.39□□□□□ -0.43
TNRC6A-204ENST00000462400 H3BRJ5 948 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 ETS1P14921 441 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 DSC3Q14574 896 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 C15orf59Q2T9L4 293 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 FOXP3Q9BZS1 431 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 KCNK13Q9HB14 408 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 CHST12Q9NRB3 414 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 GALNT8Q9NY28 637 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 COMMD3-BMI1R4GMX3 469 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 B2RBV5 119 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 USP1O94782 785 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 IL1R2P27930 398 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 CCNFP41002 786 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 BRCC3P46736 316 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 LSAMPQ13449 338 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 MYBPC3Q14896 1274 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 SENP8Q96LD8 212 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 MTO1Q9Y2Z2 717 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
TNRC6A-204ENST00000462400 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 FCHO1O14526 889 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 DNAJC6O75061 913 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 CABYRO75952 493 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 KRT1P04264 644 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 LCP1P13796 627 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 LRPAP1P30533 357 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 PNPLA4P41247 253 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ARSEP51690 589 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 CDC16Q13042 620 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 GPS1Q13098 491 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 PPP1R2P3Q6NXS1 205 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 RIPOR1Q6ZS17 1223 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ST13P4Q8IZP2 240 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 FBXO27Q8NI29 283 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 CCDC110Q8TBZ0 833 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 LINC01599Q8WXQ3 324 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 HAUS1Q96CS2 278 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 CLPTM1LQ96KA5 538 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ZNF148Q9UQR1 794 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 TDRD15B5MCY1 1934 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 B4GALT3O60512 393 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 OPHN1O60890 802 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms