RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RAE1P78406 368 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 DGCR2P98153 550 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 MPP3Q13368 585 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 DNASE1L3Q13609 305 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 NFIL3Q16649 462 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 LSM12Q3MHD2 195 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 FAM153CQ494X1 144 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PCID2Q5JVF3 399 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 CCDC30Q5VVM6 783 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ANO7Q6IWH7 933 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 KIRREL2Q6UWL6 708 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 C16orf89Q6UX73 402 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 C4orf50Q6ZRC1 276 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 BBS12Q6ZW61 710 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 USP51Q70EK9 711 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 LRRC8DQ7L1W4 858 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 RASGRP2Q7LDG7 609 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ZNF804AQ7Z570 1209 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PEG10Q86TG7 708 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 PTGR2Q8N8N7 351 aaPredicted RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 SRFBP1Q8NEF9 429 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 SLC2A12Q8TD20 617 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 NOC3LQ8WTT2 800 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 CACTINQ8WUQ7 758 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 ST8SIA4Q92187 359 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ZUFSPQ96AP4 578 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ARRDC3Q96B67 414 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 CTHRC1Q96CG8 243 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PRR11Q96HE9 360 aaPredicted RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 PPP1R10Q96QC0 940 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 MLST8Q9BVC4 326 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ADGRE3Q9BY15 652 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ZNF341Q9BYN7 854 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PAIP1Q9H074 479 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 CLPBQ9H078 707 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PDCL3Q9H2J4 239 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 KCNK9Q9NPC2 374 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 DUSP22Q9NRW4 184 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 RXFP3Q9NSD7 469 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 OLA1Q9NTK5 396 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 DLL3Q9NYJ7 618 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 SLC25A13Q9UJS0 675 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ADAMTS5Q9UNA0 930 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 ST3GAL5Q9UNP4 418 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 GDAQ9Y2T3 454 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 LMTK3Q96Q04 1460 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 WDR27A2RRH5 827 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 B4E171 279 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 H0YIZ8 118 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 EXOC3O60645 756 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 BAIAP3O94812 1187 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 C1RP00736 705 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CENPBP07199 599 aaPredicted RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 CYP21A2P08686 494 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 BDNFP23560 247 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 DUSP1P28562 367 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 GALNSP34059 522 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 PSMC2P35998 433 aaKnown RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 TSPAN7P41732 249 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 GRIA3P42263 894 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 NR1H2P55055 460 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CASP6P55212 293 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 LMAN2Q12907 356 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 PDE1CQ14123 709 aaPredicted RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 DCTN1Q14203 1278 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CDSNQ15517 529 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CNGA3Q16281 694 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 ERCC6LQ2NKX8 1250 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 WDR45BQ5MNZ6 344 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CBWD5Q5RIA9 395 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 LIPMQ5VYY2 423 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SLC29A4Q7RTT9 530 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 MRGPREQ86SM8 312 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SFTPA1Q8IWL2 248 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 C12orf76Q8N812 135 aaPredicted RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 ADPRHL1Q8NDY3 354 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SH3RF3Q8TEJ3 882 aaPredicted RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 GLMPQ8WWB7 406 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 KCNJ9Q92806 393 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 RNF125Q96EQ8 232 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SORCS2Q96PQ0 1159 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 LENG8Q96PV6 779 aaPredicted RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 MMS19Q96T76 1030 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 ELOVL1Q9BW60 279 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CIPCQ9C0C6 399 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CDCP1Q9H5V8 836 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 VEZTQ9HBM0 779 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SERTAD4Q9NUC0 356 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 ABHD10Q9NUJ1 306 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 ALKBH4Q9NXW9 302 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 AASSQ9UDR5 926 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 CNOT7Q9UIV1 285 aaKnown RBP3.51□□□□□ -1.85
VCL-203ENST00000461383 HSF4Q9ULV5 492 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 SCINQ9Y6U3 715 aa3.51□□□□□ -1.85
VCL-203ENST00000461383 LINC00473A8K010 186 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 GCOM1H8Y6P7 765 aaPredicted RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 GRM8O00222 908 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TSPAN4O14817 238 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CCNT1O60563 726 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms