RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 THBS4P35443 961 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 IGHMBP2P38935 993 aaKnown RBP4.28□□□□□ -1.72
CLK1-206ENST00000461326 GRIA3P42263 894 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 MRPS35P82673 323 aaKnown RBP4.28□□□□□ -1.72
CLK1-206ENST00000461326 CHRNDQ07001 517 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 CCDC15Q0P6D6 951 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 FAM187BQ17R55 369 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 AAK1Q2M2I8 961 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 AARS2Q5JTZ9 985 aaKnown RBP4.28□□□□□ -1.72
CLK1-206ENST00000461326 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 RRAGAQ7L523 313 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 RASGRP2Q7LDG7 609 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 C1QL2Q7Z5L3 287 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 TMTC1Q8IUR5 882 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 FSIP1Q8NA03 581 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 PPHLN1Q8NEY8 458 aaKnown RBP4.28□□□□□ -1.72
CLK1-206ENST00000461326 OR52L2PQ8NGH6 319 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 ASB12Q8WXK4 309 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 NPIPB3Q92617 1050 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 COG8Q96MW5 612 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 PIGSQ96S52 555 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 JMJD4Q9H9V9 463 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 ALG13Q9NP73 1137 aaKnown RBP4.28□□□□□ -1.72
CLK1-206ENST00000461326 UBN1Q9NPG3 1134 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 DUSP22Q9NRW4 184 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 MGAT4CQ9UBM8 478 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 POLR2AP24928 1970 aaKnown RBP4.27□□□□□ -1.73
CLK1-206ENST00000461326 FAM90A20PA6NIJ5 464 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 QSOX1O00391 747 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 CES2O00748 559 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 PYGLP06737 847 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 TMIGD3P0DMS9 266 aaPredicted RBP4.27□□□□□ -1.73
CLK1-206ENST00000461326 YY1P25490 414 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 DUSP1P28562 367 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 MCM5P33992 734 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 CASP2P42575 452 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 PCP4P48539 62 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 RBM5P52756 815 aaKnown RBP eCLIP4.27□□□□□ -1.73
CLK1-206ENST00000461326 SLC12A1Q13621 1099 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 GPR162Q16538 588 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 GRHL2Q6ISB3 625 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 RETSATQ6NUM9 610 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 WDR93Q6P2C0 686 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 TMEM88Q6PEY1 159 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 DPY19L3Q6ZPD9 716 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 CPOQ8IVL8 374 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 ESX1Q8N693 406 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 PTGR2Q8N8N7 351 aaPredicted RBP4.27□□□□□ -1.73
CLK1-206ENST00000461326 FAM71DQ8N9W8 422 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 ADPRHL1Q8NDY3 354 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 ACTRT2Q8TDY3 377 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 TFAP2BQ92481 460 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 RILPL2Q969X0 211 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 SKA1Q96BD8 255 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 KTI12Q96EK9 354 aaPredicted RBP4.27□□□□□ -1.73
CLK1-206ENST00000461326 SENP7Q9BQF6 1050 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 TMEM160Q9NX00 188 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 DKK3Q9UBP4 350 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 ADAMTS5Q9UNA0 930 aa4.27□□□□□ -1.73
CLK1-206ENST00000461326 SETD1BQ9UPS6 1966 aaKnown RBP4.27□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3DA0A087WVF3 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3IA0A087WXS9 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3EA0A087X179 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3KA0A087X1G2 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3BA6NDS4 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3FA6NER0 549 aaPredicted RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3LB9A6J9 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 EYA2O00167 538 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 AP4M1O00189 453 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 PROP1O75360 226 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 ALDOAP04075 364 aaKnown RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 POLBP06746 335 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 SLC3A2P08195 630 aaKnown RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 CYP3A4P08684 503 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3HP0C7X1 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 RXRAP19793 462 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 CNTFP26441 200 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 ELF1P32519 619 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 CYP2C18P33260 490 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 GRK5P34947 590 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 KRT9P35527 623 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 DIO1P49895 249 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 EEFSECP57772 596 aaKnown RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 SIM1P81133 766 aaPredicted RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLK1-206ENST00000461326 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 DCTN1Q14203 1278 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 ZNF169Q14929 603 aaPredicted RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 ANKRD40Q6AI12 368 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3GQ6DHY5 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3CQ6IPX1 549 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 GRASPQ7Z6J2 395 aaPredicted RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 TBC1D3Q8IZP1 549 aaPredicted RBP4.26□□□□□ -1.73
CLK1-206ENST00000461326 LINC01465Q8N7H1 131 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 TSPYL6Q8N831 410 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 CSGALNACT1Q8TDX6 532 aa4.26□□□□□ -1.73
CLK1-206ENST00000461326 MAELQ96JY0 434 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms