RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ANAPC2Q9UJX6 822 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 PLA2G4CQ9UP65 541 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 ENTPD4Q9Y227 616 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 BTBD3Q9Y2F9 522 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 A0A0A6YYK5 440 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 RGS14O43566 566 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 HOXB8P17481 243 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 CYP11B2P19099 503 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 TTKP33981 857 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 GPR1P46091 355 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 NEDD8Q15843 81 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC157Q569K6 752 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 SPANXN3Q5MJ09 141 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 AGMOQ6ZNB7 445 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 EXOC3L1Q86VI1 746 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 ARHGEF19Q8IW93 802 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 FNDC5Q8NAU1 212 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 KAT2BQ92831 832 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 SKA1Q96BD8 255 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 DNAJC1Q96KC8 554 aaKnown RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 CDC42EP4Q9H3Q1 356 aaKnown RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 EPB41L4AQ9HCS5 686 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-205ENST00000461221 NT5MQ9NPB1 228 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 RRN3Q9NYV6 651 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 ADGBQ8N7X0 1667 aa9.2□□□□□ -0.94
BRCA1-205ENST00000461221 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ERI2A8K979 691 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 C2CD2LO14523 706 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYB561D2O14569 222 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 MRASO14807 208 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 INPP4BO15327 924 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 RGS20O76081 388 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ETS1P14921 441 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TPP2P29144 1249 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CASP4P49662 377 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 BCAP31P51572 246 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SREBF2Q12772 1141 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 XRCC4Q13426 336 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 EPC2Q52LR7 807 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SAMD4BQ5PRF9 694 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 C11orf63Q6NUN7 778 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 MPZL3Q6UWV2 235 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TRMT11Q7Z4G4 463 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 MIB1Q86YT6 1006 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 NOA1Q8NC60 698 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 GLT1D1Q96MS3 346 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CGRRF1Q99675 332 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 BTBD10Q9BSF8 475 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TMEM216Q9P0N5 145 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 DAGLAQ9Y4D2 1042 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SLC12A8A0AV02 714 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYP1A1P04798 512 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYP2A6P11509 494 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TCF7P36402 384 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 RAB2AP61019 212 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYP2A13Q16696 494 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CBWD3Q5JTY5 395 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CBWD5Q5RIA9 395 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYP20A1Q6UW02 462 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 C16orf86Q6ZW13 317 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC33Q8N5R6 958 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC185Q8N715 623 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF655Q8N720 491 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 OR6Y1Q8NGX8 325 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ATP8B4Q8TF62 1192 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SH2D3AQ9BRG2 576 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 FAM192AQ9GZU8 254 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 NUAK2Q9H093 628 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TRIM39Q9HCM9 518 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 USP18Q9UMW8 372 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ARHGEF40Q8TER5 1519 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TAF4O00268 1085 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SEC22BO75396 215 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 HIST1H2ABP04908 130 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 GZMAP12544 262 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 NTSP30990 170 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 NAMPTP43490 491 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 NPY2RP49146 381 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CDC42P60953 191 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CDH17Q12864 832 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 DCTN2Q13561 401 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 AKIRIN2Q53H80 203 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 OTUD3Q5T2D3 398 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 HIST3H2AQ7L7L0 130 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 OR52L1Q8NGH7 329 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ITFG1Q8TB96 612 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 DLG3Q92796 817 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 HIST1H2ACQ93077 130 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CPNE1Q99829 537 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ISCA1Q9BUE6 129 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 REEP1Q9H902 201 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 EHD3Q9NZN3 535 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SGPL1O95470 568 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms