RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 TMEM121Q9BTD3 319 aa16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 SLC12A6Q9UHW9 1150 aa16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 HBS1LQ9Y450 684 aaKnown RBP16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 HEY1Q9Y5J3 304 aa16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 SNX10Q9Y5X0 201 aa16.38■□□□□ 0.21
PCYT1A-212ENST00000460677 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 H3BNC9 293 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 DCLK1O15075 740 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 LRIG2O94898 1065 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 MOCS2O96007 188 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 KRT14P02533 472 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 ERCC2P18074 760 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 IRS1P35568 1242 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 NRG1Q02297 640 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 GBE1Q04446 702 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 MTA1Q13330 715 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 GPM6BQ13491 265 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 PAFAH1B3Q15102 231 aaKnown RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 PABPC1LQ4VXU2 614 aaKnown RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 BZW1Q7L1Q6 419 aaKnown RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 GSPT2Q8IYD1 628 aaKnown RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 ATP6V0D2Q8N8Y2 350 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 CCDC89Q8N998 374 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 CCHCR1Q8TD31 782 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 AENQ8WTP8 325 aaKnown RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 C1orf74Q96LT6 269 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 GDF15Q99988 308 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 SIK2Q9H0K1 926 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 ZNF334Q9HCZ1 680 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 NFU1Q9UMS0 254 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 SNX24Q9Y343 169 aa16.37■□□□□ 0.21
PCYT1A-212ENST00000460677 GBF1Q92538 1859 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 H7C0C1 242 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 SGK1O00141 431 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 COCHO43405 550 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 F11P03951 625 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 STIP1P31948 543 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 PBX2P40425 430 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 ATP5OP48047 213 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 MLLT6P55198 1093 aaPredicted RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 SLC10A2Q12908 348 aaPredicted RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 XRCC4Q13426 336 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 TRIP13Q15645 432 aaPredicted RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 MANEALQ5VSG8 457 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 DARS2Q6PI48 645 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 PDZD4Q76G19 769 aaPredicted RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 ZC3H18Q86VM9 953 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 ELMOD1Q8N336 334 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 RSAD2Q8WXG1 361 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 BTN2A3PQ96KV6 586 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 NACA2Q9H009 215 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 IL21Q9HBE4 155 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 DTLQ9NZJ0 730 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 ASIC3Q9UHC3 531 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 XPO7Q9UIA9 1087 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 HS3ST4Q9Y661 456 aa16.36■□□□□ 0.21
PCYT1A-212ENST00000460677 BCLAF3A2AJT9 711 aaKnown RBP16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 CFAP69A5D8W1 941 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 SEC31AO94979 1220 aaKnown RBP16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 HMBSP08397 361 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 SRGAP2BP0DMP2 458 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 EPHB2P29323 1055 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 ECHS1P30084 290 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 HOXC13P31276 330 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 GGCXP38435 758 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 PPM1LQ5SGD2 360 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 UNC45BQ8IWX7 931 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 TBC1D31Q96DN5 1066 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 PBX4Q9BYU1 374 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 FAM129AQ9BZQ8 928 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 C10orf88Q9H8K7 445 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 PCDH9Q9HC56 1237 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 GRHL1Q9NZI5 618 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 WHRNQ9P202 907 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 MSRAQ9UJ68 235 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 NEU3Q9UQ49 428 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 MFHAS1Q9Y4C4 1052 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 RAD54BQ9Y620 910 aa16.35■□□□□ 0.21
PCYT1A-212ENST00000460677 C2orf78A6NCI8 922 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 HACD1B0YJ81 288 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 FGF10O15520 208 aaPredicted RBP16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 MFSD11O43934 449 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 CLASP2O75122 1294 aaKnown RBP16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 ITIH2P19823 946 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 IVDP26440 423 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 ADCY8P40145 1251 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 COG7P83436 770 aa16.34■□□□□ 0.21
PCYT1A-212ENST00000460677 RAB30Q15771 203 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms