RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HSFY1Q96LI6 401 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 CNBD2Q96M20 576 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 SPATA13Q96N96 652 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ECSITQ9BQ95 431 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PRKD2Q9BZL6 878 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 COG5Q9UP83 839 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 TBC1D4O60343 1298 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 LTFP02788 710 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 MMP8P22894 467 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 MLH1P40692 756 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 RENBPP51606 427 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 EEF1DP3Q658K8 133 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 WNT8BQ93098 351 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 FAM162AQ96A26 154 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ULBP1Q9BZM6 244 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ACSS3Q9H6R3 686 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PRDM5Q9NQX1 630 aaPredicted RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 HEATR9A2RTY3 570 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 M0R2N6 131 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ALOX15BO15296 676 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 USP12O75317 370 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 VAPBO95292 243 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 CRTAMO95727 393 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 DNAJB2P25686 324 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 PRKAA2P54646 552 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 FAM117BQ6P1L5 589 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 V9GYQ6 96 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 H7C4K7 107 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 UNC5CO95185 931 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF135P52742 658 aaPredicted RBP15.13■□□□□ 0.01
PTPRU-205ENST00000460170 SLC22A9Q8IVM8 553 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 KLHL4Q9C0H6 718 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 WWOXQ9NZC7 414 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 C2CD2Q9Y426 696 aa15.13■□□□□ 0.01
PTPRU-205ENST00000460170 UBDO15205 165 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 ST8SIA6P61647 398 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 SNX13Q9Y5W8 968 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 C2CD2LO14523 706 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 PSEN2P49810 448 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 RAB27AP51159 221 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 BTKQ06187 659 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 LLGL2Q6P1M3 1020 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 POU5F2Q8N7G0 328 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 OR9Q1Q8NGQ5 310 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 CHCHD3Q9NX63 227 aaKnown RBP15.12■□□□□ 0.01
PTPRU-205ENST00000460170 PRPF4O43172 522 aaKnown RBP eCLIP15.12■□□□□ 0.011e-7■■■■■ 27.9
PTPRU-205ENST00000460170 FKBP9O95302 570 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 TPBGLP0DKB5 382 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 DDX5P17844 614 aaKnown RBP15.12■□□□□ 0.01
PTPRU-205ENST00000460170 TUBP50607 506 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 AGKQ53H12 422 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF280DQ6N043 979 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 FKBP9P1Q75LS8 142 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 VTI1BQ9UEU0 232 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 hCG_2014768A0A024R1R8 64 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 E7ENQ6 273 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 B4GALT5O43286 388 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 PLEKHA7Q6IQ23 1121 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 APBA2Q99767 749 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 UNKQ9C0B0 810 aaKnown RBP15.12■□□□□ 0.01
PTPRU-205ENST00000460170 NDUFA13Q9P0J0 144 aa15.12■□□□□ 0.01
PTPRU-205ENST00000460170 EVPLLA8MZ36 301 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 BANF1O75531 89 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 CRABP2P29373 138 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PEX5P50542 639 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 KRT72Q14CN4 511 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TAGAPQ8N103 731 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PCSK9Q8NBP7 692 aaKnown RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 BSNDQ8WZ55 320 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 BHMTQ93088 406 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 SENP8Q96LD8 212 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TEX12Q9BXU0 123 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 COG4Q9H9E3 785 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NMRAL1Q9HBL8 299 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 SCHIP1Q9P0W5 487 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NCF1BA6NI72 391 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ERI2A8K979 691 aaKnown RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NCF1CA8MVU1 366 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 NCF1P14598 390 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PTPN1P18031 435 aaKnown RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF470Q6ECI4 717 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TTC33Q6PID6 262 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 TNIP2Q8NFZ5 429 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 MTG1Q9BT17 334 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 THUMPD3Q9BV44 507 aaKnown RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 MMADHCQ9H3L0 296 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-205ENST00000460170 RNF19AQ9NV58 838 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 DMAC2Q9NW81 257 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ASMTLO95671 621 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 ALBP02768 609 aa15.11■□□□□ 0.01
PTPRU-205ENST00000460170 PPIL2Q13356 520 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms