RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 APOL1O14791 398 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 GPR37O15354 613 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 CST8O60676 142 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 GLP2RO95838 553 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 EFEMP2O95967 443 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 HAPLN1P10915 354 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 SLC2A3P11169 496 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 YWHAQP27348 245 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 AVPR2P30518 371 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 HTR7P34969 479 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 NBL1P41271 181 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 TNNT3P45378 269 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 NDUFV1P49821 464 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 CAV1Q03135 178 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SCAPQ12770 1279 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 CALCOCO2Q13137 446 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 NME3Q13232 169 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PLD1Q13393 1074 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PTK6Q13882 451 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 BYSLQ13895 437 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 DPYSL3Q14195 570 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 VEPH1Q14D04 833 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 ATP13A4Q4VNC1 1196 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 BRMS1LQ5PSV4 323 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 ACBD5Q5T8D3 534 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 TXNRD3NBQ6F5E7 133 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 DENND5BQ6ZUT9 1274 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PDZD4Q76G19 769 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 GSTA5Q7RTV2 222 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 BNIPLQ7Z465 357 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PDZD8Q8NEN9 1154 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 FAM71BQ8TC56 605 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 C1orf54Q8WWF1 131 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 OVCA2Q8WZ82 227 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SEC14L1Q92503 715 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SUSD6Q92537 303 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 NKD2Q969F2 451 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 RNF34Q969K3 372 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 FBXO32Q969P5 355 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PKNOX2Q96KN3 472 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SERPINB11Q96P15 392 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PGLYRP2Q96PD5 576 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 PEBP4Q96S96 227 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 EPC1Q9H2F5 836 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 SMOC2Q9H3U7 446 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 DHX35Q9H5Z1 703 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 PCDH18Q9HCL0 1135 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 TLR8Q9NR97 1041 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 MRPL17Q9NRX2 175 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 TMEM30AQ9NV96 361 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 FAM86C1Q9NVL1 165 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 DDIT4Q9NX09 232 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 ASIC3Q9UHC3 531 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 DRG1Q9Y295 367 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 CDY1Q9Y6F8 540 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 EP300Q09472 2414 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 TCRBV7S2A1N4TA0A589 114 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 PRR23AA6NEV1 266 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 LIASO43766 372 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ITGAVP06756 1048 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 KRT10P13645 584 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ATF2P15336 505 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 DNAJB1P25685 340 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ELF1P32519 619 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 CTNNB1P35222 781 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ACTN2P35609 894 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 PBX3P40426 434 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 NR2C2P49116 596 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ARSEP51690 589 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 KPNA1P52294 538 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 ROR1Q01973 937 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 SNX1Q13596 522 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 PPP6R3Q5H9R7 873 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 SH3PXD2AQ5TCZ1 1133 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 MSANTD2Q6P1R3 559 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 PRSS55Q6UWB4 352 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 C4orf22Q6V702 233 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 EP400NLQ6ZTU2 488 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 CYP4V2Q6ZWL3 525 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 TMEM173Q86WV6 379 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 FAM131BQ86XD5 332 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 HDAC7Q8WUI4 952 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 BCL7CQ8WUZ0 217 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 IFT81Q8WYA0 676 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 P3H4Q92791 437 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 CAVIN3Q969G5 261 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ACSF2Q96CM8 615 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 LRRC45Q96CN5 670 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms